Sphingobium sp. SYK-6: SLG_11290
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Entry
SLG_11290 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_11290
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_11290
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAK65804
LinkDB
All DBs
Position
complement(1199606..1201939)
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AA seq
777 aa
AA seq
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MMKQQTRVVRLMAGAALCAMTMPMQLHAQEAPDEAAGANDASTEEIVVTAQFRRESAQKT
AISIDVLSADKLQQAGVSQATDIARLSPGVQITQGGSALQVYIRGAGDFSTTGYSNSAVA
QAYDGVFAARTQYVAGTFFDLERVEVLKGPQGTLYGRNSTGGAINIIPVEPRIGTFEGYV
SAGFQNYNGFNAEGAINIPIGTSSALRASFQGVSREGYISDGTDDDKHHSFRLQFKTEPS
ADVTLRLGLNYQHLGGRGPGKVVYEPTAPNAPGITNPQPIIPDDRWTSIDESLNALIGRV
TAPPGIYPLDTSQVYQNITIWGVNAHLDWNLGPATLTVIPAYQRVETDSLVMPALYFNTV
NEFTGAPSTSDAKTLEIRLGNANDKLKWVVGGYYFREDQDSYNSVRLGFASDTAFVADLS
TEAYAAFGELTYSLTDALRLTGGLRYTDEKKSVDGHRYALFGSAGCTTPGTGPQNSCEIL
TSAGTNVQGTYSVNKLNFKAGAEFDAGPDSMLYASVATGFKSGGQSNADIDPYKPEEVTA
YTLGAKNRFFNRLVQFNAELFYMDYRDRQENFTSLDRGGAQVSSLFNAGKAVAKGASIDL
TLFPSRNDQFRVAVEYVDSEYKEFSYRNYRAANPSARTSCDVTPVAGGTTQIGFWTIDCT
GFQLPRTPTWSGTVSYTHTFDLANGAAIEFSPDMSFASSRWLAAEFVENARADAYALFNA
SLTYRAPDNGYSVQLFVRNIGNEAVYTGTQQYPFINNYNGQDIAPPRTYGARFRVRF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagcagacccgcgtcgtccgtctgatggccggcgcagccctgtgtgcgatg
acgatgcccatgcagcttcatgcgcaggaggcgcccgacgaggctgccggggcgaacgac
gcgtccaccgaggaaatcgtggtcaccgcgcaattccggcgcgagagcgcccagaagacg
gccatctccatcgacgtgctgtccgccgacaagctgcagcaggccggcgtttcccaggcc
accgacatcgcccgcctctcaccgggcgtgcagatcacacagggcggttcggcgctccag
gtctatatccgcggcgcgggcgacttctccacgaccggctacagcaactcggccgttgcg
caggcctatgacggcgtgttcgcggcgcgcacccaatatgtcgccggcaccttcttcgat
ctcgagcgcgtggaagtgctcaagggcccccagggcacactttatggccgcaactcgacc
ggcggcgccatcaacatcattcccgtcgagccgcggatcggtacgttcgagggttatgta
agcgcgggctttcagaactataacggcttcaatgccgagggcgcgatcaacatcccgatc
ggcacgagctcagccttgcgcgcctcgttccagggcgtctcgcgcgaaggttatatcagc
gacggcacggatgacgacaagcatcattcctttcgcctgcagttcaagaccgaaccgagc
gcggacgtcactttgcgcctcggcctcaactaccagcatctcggcggccgtggccccggc
aaggtggtctatgaacccaccgcgcccaacgcgcccgggatcaccaatccccagccgatc
atccccgacgatcgctggacatccatcgacgaaagcctgaacgcgctgatcggccgcgtt
accgcgcccccgggcatctatccgctcgatacgagccaggtgtaccagaacatcacgatc
tggggcgtcaatgcccatctcgactggaatctcggccccgcgacgctcaccgtcatcccc
gcctatcagcgcgtggaaacggattccctcgtcatgccggccctctacttcaacacggtc
aacgagttcaccggcgcaccatccacctccgacgccaagaccctggaaatccgtctcggc
aatgcgaacgacaagctcaaatgggtcgtgggcggctattatttccgcgaggatcaggac
agctacaattcggtgcgactgggcttcgcctcggacaccgccttcgtcgcggacctgagc
acggaggcttatgccgctttcggcgaactcacctactcgctgacggacgcgctgcgcttg
acgggcggcctgcgctataccgatgaaaagaagagcgtcgacggccatcgctatgcgctc
ttcggctcggcaggctgcaccacgcccgggaccggaccgcagaacagctgcgagatcctg
acgtcggccggcacaaacgtgcagggcacctacagcgtcaacaagctgaacttcaaggcg
ggcgcggagttcgatgccggccccgacagcatgctctatgcgagcgtcgcgacgggcttc
aagtccggcggccagtccaatgcggacatcgacccctacaagcccgaggaagtgacagcc
tatacgctgggcgccaagaaccgcttcttcaaccgtctggtccagttcaacgccgagctg
ttctatatggattatcgcgaccggcaggagaatttcacgtcgctggatcgcggcggcgcg
caggtttcctccctgttcaacgccggcaaggccgtggccaagggcgcgagcatcgacctg
acgctcttcccctcccgcaacgaccagttccgggtcgcagtcgaatatgtcgacagcgaa
tacaaggaattctcctatcgcaactatcgggcggccaatccctcggcacgcacgtcgtgc
gacgtgacgccggtcgccgggggcacgacgcagatcggcttctggacgatcgactgcacc
ggcttccagctgccgcgcacgcccacatggtccggcacggtcagctatacgcacacattc
gacctggccaatggcgccgcgatcgaattctcgccggacatgagctttgcatcctcgcgc
tggctcgccgccgagttcgtcgagaacgcacgggccgatgcctatgccttgttcaacgcg
agcctcacctaccgggcgccggacaatggctattccgtccagctcttcgtgcggaacatc
ggaaacgaggcggtctataccggcacgcagcagtatcccttcatcaacaactataatggt
caggacatcgctccgccgcgcacatacggcgcgcgcttccgggtgcggttctga
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