Sphingobium sp. SYK-6: SLG_11690
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Entry
SLG_11690 CDS
T01622
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssy03016
]
SLG_11690 (truB)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLG_11690 (truB)
Transfer RNA biogenesis [BR:
ssy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLG_11690 (truB)
Prokaryotic type
SLG_11690 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAK65844
UniProt:
G2IQ16
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All DBs
Position
1260831..1261778
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AA seq
315 aa
AA seq
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MIAPASDPAPLHGWLILDKPVGMGSTQAVSAVKRMLREAGLPRGKIGHGGTLDPLAEGVL
PVAIGEATKLAGRMLDSDKIYDFTVRFGAQTDTLDLEGAVIETSAQRPTRAQVEAVLPRF
TGPIEQAPPAYSAIKIEGRRAYDLARAGEEVEMKLRAVTVHGLTLADAVPEEAAEGAPDG
GLASVTLTAHVSKGTYIRSLARDIAQALGTVGHVTMLRRRKAGPFGLDQAISLDILNDAA
KARAIAQHMLPLTAGLDDIPALPVTSEQAMALRQGRTLAGDPRTQGLMLATEGETPVALV
EALGPDIRVVRGFNL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctcctgcttccgaccccgcgccgctccatggctggctcatcctggacaagccc
gtcggcatggggtccacccaggcagtgagcgcggtcaagcggatgctgcgcgaggcgggg
ctgccgcgggggaagatcggccatggcggaacgctcgatccgctggcggaaggtgtgctg
cccgtggccatcggcgaagcgaccaagctcgccgggcggatgctggacagcgacaagatc
tatgatttcaccgtgcgcttcggcgcgcagaccgacacgctcgatctggaaggcgcggtg
atcgagaccagtgcgcagcggcccacgcgcgcgcaggtcgaggccgtgctgccgcgcttt
accgggccgatcgagcaggccccgcccgcctacagtgcgatcaagatcgaggggcggcgg
gcctatgatctggcgcgcgccggcgaggaggtggagatgaagctgcgcgccgtgacggtg
catggcctcacgcttgccgatgccgtgccggaagaggcggccgagggcgcgccggacggg
gggcttgcgtcggtcacgctcaccgcccatgtatcgaaaggcacttatatccgcagcctt
gcccgcgacatcgcgcaggcgctcggcaccgtgggtcatgtgaccatgttgcggcggcgc
aaggcagggccgttcgggctggatcaggcgatttcgctggacattctgaacgatgctgct
aaggcgcgcgccattgcgcagcatatgctgccattgacggcagggctggacgacatcccg
gctcttcccgtcacctccgagcaggccatggccctcagacagggccggacgctcgccggg
gatcctcgcacgcaggggctcatgctggcgaccgagggcgaaacgcccgtggcgctggtg
gaggctttggggccggacatccgggtcgtgcggggcttcaatctctag
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