Sphingobium sp. SYK-6: SLG_12190
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Entry
SLG_12190 CDS
T01622
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00250
Alanine, aspartate and glutamate metabolism
ssy00310
Lysine degradation
ssy00350
Tyrosine metabolism
ssy00650
Butanoate metabolism
ssy00760
Nicotinate and nicotinamide metabolism
ssy01100
Metabolic pathways
ssy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SLG_12190 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SLG_12190 (gabD)
00310 Lysine degradation
SLG_12190 (gabD)
00350 Tyrosine metabolism
SLG_12190 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SLG_12190 (gabD)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SLG_12190 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SLG_12190 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SLG_12190 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAK65894
UniProt:
G2IQM2
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Position
1324927..1326390
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AA seq
487 aa
AA seq
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MDQSQRNAVIAYKPLLRAAAYVDGQWVDGAAGRTIEVTDPFTGGLITTIPALEQAQVQAA
IDAAARAFPAWARTPARERGKILRRLLDLIMAHRDDLARLITLENGKPLKEAYGEVDYGA
GFVEVYAEEAPRALGEIIPAPVPGRKLYAEREPVGVSVAITPWNFPLAMLTRKFAPALAA
GCTMVAKPASQTPLAALALAQLAEEAGVPPGVFSVVTGSAGMIGDLFTSSPIVRKLSFTG
STEVGVKLMAACAPTVKRLSMELGGNAPMLIFDDADLATAVDAAMIAKFRNCGQSCIAAN
RIYVQRGIYDAFVESFAQRVAAMKLGDGLEEDTDIGPLIDAPAVAKVNEHLEDALSGGGR
LLVGGKGEGRMQPPTLVVDVAPGALLTREETFGPLAGLVAFDGYEDAIRLANDTPFGLAS
YVCSTSSTTIAHASRDIESGMVGVNTGLISTPYAPFGGVKLSGIGKEGSSHGLDEYLNIK
YVCHAGL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaagtcagcgcaacgccgtcatcgcctacaagcctcttctccgcgccgccgct
tatgtcgatggccaatgggtggacggcgcggccggccggacgatcgaggtcaccgatccg
ttcaccggcggcctcatcaccaccattcccgcgctcgagcaggcgcaggtgcaggcagcg
atcgatgccgccgcgcgcgcgttcccggcatgggcgcgcaccccggcgcgcgagcgcggc
aagatcctgcgccggctgctggatctcatcatggcccatcgcgacgatctcgcgcggctc
atcacgctggagaatggcaagccgctcaaggaagcttatggcgaggtcgattatggcgcc
ggcttcgtcgaggtctatgccgaggaagcgccgcgcgcgctgggcgagatcattcccgcg
ccggtgccggggcgcaagctctatgctgagcgcgagccggtcggcgtcagcgtggcgatc
acgccctggaacttcccgctggcgatgctgacgcgcaagttcgcgcccgcgctcgcggcg
ggctgcacgatggtcgccaagcctgccagccagacgccgcttgccgcactcgcgctggcc
cagctcgccgaggaagcgggcgtgccgccgggcgtgttcagcgtcgtcaccggcagcgcg
ggcatgatcggggacctgttcacctcatcgcccatcgtgcgcaagctgagcttcacgggg
tcgaccgaggtcggcgtgaagctgatggcggcctgcgcgcccacggtgaagcggctctcc
atggagctgggcggcaacgcgccgatgctgatcttcgacgatgccgatctcgccaccgcc
gtcgatgcggcgatgatcgccaagttccgcaattgcggccagagctgcatcgcggccaat
cgcatctatgtgcagaggggcatttacgacgcgttcgtggagagcttcgcgcagcgcgtg
gccgccatgaagctgggtgacgggctggaggaggacacggacatcggtccgctcatcgac
gcgccggccgtcgccaaggtcaacgaacatctcgaggatgcgctttccggcggggggcgg
ctgctggttggcggcaagggcgaggggcggatgcagccgccgacgctggtcgtcgatgtc
gcgcccggcgccctgctcacgcgcgaggagacattcggtccgctggccggcctcgtcgcc
ttcgatggctatgaggatgcgatccgcctcgccaatgatacgccgttcgggctcgcttcc
tatgtctgctcgaccagctccacgaccatcgcgcatgccagccgcgacatcgaaagcggc
atggtcggcgtgaacaccggcctcatctcgacgccttatgcgccgttcggcggcgtcaag
ctgtcgggcatcggcaaggagggctcctcgcatggcctcgatgagtatctgaacatcaaa
tatgtctgccacgccggcctttga
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