Sphingobium sp. SYK-6: SLG_12830
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Entry
SLG_12830 CDS
T01622
Name
(GenBank) choline dehydrogenase
Organism
ssy
Sphingobium sp. SYK-6
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
DAO
FAD_binding_2
Lycopene_cycl
NAD_binding_8
Pyr_redox_2
DTP-pb9_B-dom
Thi4
TrkA_N
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BAK65958
UniProt:
G2IQT6
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Position
1398127..1399785
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AA seq
552 aa
AA seq
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MVDVRTVDYVIVGAGSAGCVLANRLSADRHTEVVVLEAGGDDRPTRELSQFRSNLMIHIP
IGFGKTLNDPKVNWLYETEVDEGSGGRPHKWPKGKVLGGSSSLNGLLYVRGQSADYDGWR
QMGNEGWAWDDVLPYFKKSEDQQRGAIEGHGTGGGLSVSDFPEQHPVSKALIDACVQAGY
GYKDDLNDGDQEGTSWFQMTARNGRRCSAAVGFLHPVMDRPNLTVELRAMTTRILFEGKR
AVGIEFRQHDRMRRVMVRREVILAAGAVESPKLLEISGVGQGALVQSLGVPLVHELPGVG
ENLQDHYMIGCQARLKPGTPSVNSMASGLPLVGQIFKYGFTRKGLLSYAVAHGCTFLRSR
EGLETPDIQIHTMAASMDLEVLNAKQQLALEKEPGLASNPCQLRPESRGSIHARTPDGLD
APKITPNYLADPIDQQMAVTQLKIIRHIWQQPAINKYLAGPDPFGETDDQMFHYAQVAGG
TLYHAVGTCRMGSDPKAVVDARLRVHGIEGLRVIDASVMPKIVSGNTNAASIMIGEKGSE
MILQDAKELAPA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtcagaacggtcgactatgtgattgtcggggccggaagcgcgggctgcgtg
ctcgccaaccggctctcggcggatcggcacaccgaagtggtggtgctggaggcgggcggc
gacgatcgtcccacgcgcgagctgagccagttccgctccaacctgatgatccacatcccg
atcggcttcggcaagacactcaacgatcccaaggtcaactggctctacgaaaccgaagtg
gacgagggctcgggcggtcgtccgcacaaatggcccaagggcaaggtgctgggcggctcc
tcctcgctgaacggcctgctctacgtgcgcggccagtccgccgactatgacggctggcgc
cagatgggcaatgaaggctgggcctgggatgatgtgctgccctatttcaagaagagcgaa
gatcagcagcgcggcgccatcgaggggcacggcaccggcggcggcctctccgtctccgat
ttccccgagcagcacccggtcagcaaggcgctgatcgatgcctgcgtccaggcgggctat
ggctacaaggacgacctcaacgacggcgaccaggaaggcacgagctggttccagatgacg
gcccgcaacggccggcgctgctcggcggcggtgggcttcctccatccggtgatggatcgc
ccgaacctgacggtcgagctgcgcgccatgaccacgcgcatcctgttcgagggcaagcgt
gccgtgggcatcgagttccgccagcatgatcgcatgcgccgggtgatggtccggcgggaa
gtgatcctcgcagcaggtgcggtggaaagccccaagctgctcgagatctcgggcgtgggg
cagggggcgctcgtccagtcgctgggcgtgccgctcgtccatgagctgccgggcgtcggc
gagaacctgcaggaccattacatgatcggttgccaggcgcggctcaagccgggcacgccg
tcggtcaactccatggcgagcggcctgccgctggtcggccagatcttcaaatatggcttc
acgcgcaaggggctgctgtcctacgccgtggcccatggctgcacgttcctgcgctcgcgc
gaggggctggagacgccggacatccagatccacaccatggcggcctccatggacctcgaa
gtgctcaacgcgaagcagcagctcgcgctggagaaggagccggggctcgcgtccaacccc
tgccagcttcgcccggaatcgcgcggctcgatccatgcccgcacgcccgacggcctggac
gcgccgaagatcacgcccaattatcttgccgacccgatcgaccagcagatggcggtgacg
cagctcaagatcatccgacacatctggcagcagccggcgatcaacaaatatctggccggg
cccgatcccttcggcgagacggacgaccagatgttccattatgcgcaggtcgcgggcggc
acgctctatcatgccgtgggcacgtgccgcatgggctctgaccccaaggcggtggtggat
gcgcgcctgcgcgtccacggcatcgaaggcctgcgcgtcattgatgcctcggtcatgccg
aagatcgtctccggcaataccaatgccgcctcgatcatgatcggggagaagggatcggag
atgatcctgcaggacgcgaaggaactggcgcccgcctga
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