Sphingobium sp. SYK-6: SLG_13610
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Entry
SLG_13610 CDS
T01622
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssy03009
]
SLG_13610 (rluB)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SLG_13610 (rluB)
Ribosome biogenesis [BR:
ssy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SLG_13610 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAK66036
NITE:
SLG_13610
UniProt:
G2IRH0
LinkDB
All DBs
Position
complement(1480488..1481627)
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AA seq
379 aa
AA seq
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MANATGPRGPRRPPRNGATGPAGGRRRPSADGPDARKPARSDKPRSDARSGARPPAGPDT
RSPAGKADARPATGKPGQRPATRKPGARPATDKPAFSSSRPARPPRGAARPAGKPGARKP
RDGAPEGDRAETRAGDHKADHKGDRIAKLLARAGIASRRDIERMIGEGRIALDGAVLTTP
ATILTSLRGVTVDGNPVQEPTPARLFLFHKPTGLLTTAKDPAGRPTIYDRLPKDLPRVMP
VGRLDLNTEGLLLLTTDGELKRQLELPATGVERTYRARVFGEVSQAQLEDLIEGVEIEGM
RYGRIDANLERRTGRNQWVEMTLTEGKNREVRRVLEHLGLRVSRLIRTRYGPFVLGDSQP
GEVVEVRRVDLVKFRKTLD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgccactggaccaagagggccccggcgcccgccgcgcaatggcgcgaccgga
cccgcagggggacggcgccgcccatccgccgatggcccggacgcgcgcaagcccgcccgg
tcggacaagccccgctcggacgcccgctccggcgcccgtccgcctgccggaccggacacg
cgctcaccggccggaaaggctgacgcgcgccccgccaccggaaagcccggccagcgcccc
gccactcgcaagccgggcgcacgtcccgcgaccgacaagcctgctttctcctcgtcccgc
cccgcgcgcccgccgcgcggcgctgcccggcccgcaggcaagccgggggcgcgcaagccc
cgcgacggcgctccggaaggggatcgcgccgagactcgcgccggcgatcacaaggccgat
cacaagggcgatcgcatcgccaagctgcttgcccgcgccggcatcgccagccgccgggat
atcgagcgcatgatcggcgagggccgcatcgcgctcgatggcgcggtgctcaccacgccc
gccaccatcctcacctcgctgcgcggcgtcaccgtggacggcaatccggtgcaggagccg
actcccgcccgcctcttcctgttccacaagcccaccggcctgctcaccactgcgaaggac
ccggcaggccgcccgaccatctacgaccggctgccgaaggatctgccgcgcgtcatgccc
gtcggccggctcgatcttaacacggaggggctgctgctcctcaccaccgatggcgagctc
aagcgccagctggagctgcccgccaccggcgtcgagcgcacctatcgcgcccgcgtcttc
ggcgaggtcagccaggcgcagcttgaggatctcatcgagggcgtggagatcgaaggcatg
cgctacgggcgcatcgatgccaatctggagcggcgcaccggccgcaaccagtgggtcgag
atgacgctgaccgagggcaagaaccgcgaggtgcgccgcgtgctggagcatctcgggctg
cgcgtcagccgcctcatccgcacgcgctacggccccttcgtcctcggcgattcccagccg
ggcgaggtggtggaagtgcggcgggtcgatctcgtcaagttccgcaagacactggactga
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