Sphingobium sp. SYK-6: SLG_14110
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Entry
SLG_14110 CDS
T01622
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssy03012
]
SLG_14110
Translation factors [BR:
ssy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SLG_14110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
TsaE
AAA
nSTAND3
AAA_22
NACHT
RuvB_N
AAA_13
AAA_23
AAA_5
RNA_helicase
AAA_15
SbcC_Walker_B
DUF3584
MMR_HSR1
AAA_16
DLIC
DUF4407
Motif
Other DBs
NCBI-ProteinID:
BAK66086
UniProt:
G2IRM0
LinkDB
All DBs
Position
complement(1532566..1534431)
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AA seq
621 aa
AA seq
DB search
MLNLNDITVRLGGRTILDAATAKLPPRGRVGLVGRNGAGKTTLVRVIAGMLEPDIGSVEM
PRGARLGYIAQEAPGGEETPLETVLNADTERAALLTESEATEDPDRLGEIYDRLMAIDAY
TAPSRAAQILNGLGFDEEAQQRPLSSFSGGWRMRVALASLLFSQPDLLLLDEPSNHLDLE
AVMWLEDFLRAYPATILLVSHERDFLNNVVDHILHLGSGKLTLYPGGYDAFERQRAERQA
QLASAQAKQQAEREKLRDYVARNSARASTAKQAQSRAKALARMQPIAELVDDPTLTFDFP
DPDELRPPLITLDMAAVGYDETPILRRLNLRLDPDDRVALLGRNGNGKTTLARLLAAQLA
PMEGAMNSSGKMRVGYFTQYQVEELDRDETPLQHMTALMKGASQSAVRAQLGRFGFPAQK
ATTLVGKLSGGERARLALALITRDAPHLLILDEPTNHLDVDAREALIQALNAYSGAVIVV
SHDRHMLEMTADRLVLVDSGTAKEFDGSLDDYIAFVLSKPGTDSKASGADRKEAKRLAAD
AREKQQTLRKAADKSEAALARLLAERGRIDEALADPRKADTAFSSLSPAELMKERGRLST
MIETAEIAWMEASEALEAISA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatctcaacgatatcacggttcgcctcggcgggcggaccatcctggatgctgcc
acggccaagctgcccccgcgcggacgcgtcgggctggtcggccgcaatggcgcgggcaag
acgaccctggtgcgggtcatcgctggcatgctggagccggacatcggctcggtcgagatg
ccgcgcggcgcccggctgggctatatcgcgcaggaagcgcccggcggcgaggaaacgccg
ctggaaaccgtgctcaatgccgataccgagcgcgccgccctgctcaccgagagcgaagcg
accgaagaccccgaccgcttgggcgaaatctacgatcggctgatggcgatcgatgcctac
actgccccgtcccgcgcggcgcagatcctgaacggactgggcttcgacgaggaggcgcag
cagcgcccgctttccagcttttccggcggctggcggatgcgcgtggccctcgccagcctg
ctgttctcacagcccgacctgctgctgctcgacgagccgtcgaaccacctcgatctggaa
gcggtgatgtggctggaggatttcctgcgcgcctatcccgcgacgatcctgctggtcagc
catgagcgcgatttcctgaacaatgtcgtcgaccatatcctgcatctgggcagcggcaag
ctgacgctttatcccggcggctacgatgccttcgagcggcagcgggccgaacgacaggcg
cagctcgcctcggcgcaggcgaagcagcaggcggagcgggagaagctgcgcgattatgtc
gcgcgcaattcggcgcgcgcttccacggccaagcaggcgcagtcgcgcgccaaggccctt
gcccggatgcagccgatcgcggaactggtcgatgatccgacgctgaccttcgacttcccc
gatcccgatgagctgcgccccccgctgatcacgctcgacatggcggcggtcggctatgac
gagacgccgatcctgcggcggctcaatctgcggcttgacccggatgatcgcgtcgcgctg
ctggggcgcaacggcaacggcaagacgactctcgcgcgcctgcttgccgcgcagcttgcg
ccaatggaaggcgcaatgaacagcagcggcaagatgcgcgtgggctatttcacccagtat
caggtcgaggagctggaccgcgacgaaacgccgcttcagcacatgaccgcgctgatgaag
ggcgccagccagtcggcggtacgtgcgcagttgggccgtttcggcttcccggcccagaag
gcgacgactctcgtcggcaagctctccggcggcgaacgcgcgcggctggcgctggcgctc
atcacgcgcgatgcgccccatctgctgatcctcgacgagccgaccaaccatctggatgtc
gatgcgcgcgaggccctgatccaggcgctcaacgcttattccggcgcggtgatcgtcgtc
agccacgaccgccatatgctcgagatgacggccgatcgtcttgtgctggtcgatagcggg
acggcgaaggagttcgatggatcgctggacgattatatcgccttcgtcctgagcaagccg
ggcacggattccaaggcgtccggcgccgaccggaaggaagccaagcgcctcgcggccgat
gcccgggagaagcagcagacattgcgcaaggccgccgacaagtcggaagccgccctcgct
cgcctgctggccgaacgcggcaggatcgacgaagccctggccgatccgcggaaggccgat
acggcgttctccagcctgtcccccgccgaactgatgaaggagcgcggccggctttccacg
atgatcgagacagccgagatcgcatggatggaagcgagcgaagccctggaggcgatcagc
gcctga
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