Sphingobium sp. SYK-6: SLG_14310
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Entry
SLG_14310 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_14310
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_14310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAK66106
LinkDB
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Position
complement(1556939..1559191)
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AA seq
750 aa
AA seq
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MGVVAKLGTSFLALSVALSSPALAQGSASAEIETGEQGLQDIVVTAQRRSENVQRTALSV
TAVTGETMVSRGVSQTEDLSRLTAGLQVQPSGGPYTTFAVRGVSQLGGNAFADPTVAVNL
GGVYLATPTVIHGLYLDLDRVEILKGPQGTLYGRNATAGAINVIPVRPRFEFEGSLAADV
GNYDRFNATGVLNIPISDNVAVRIAGQRVRRDGFMSDGTGDDKGEAVRASFLAEPTDNFS
VLISFDWAHQGGKGPGATLRKPCAALGRTGVSCFVADPYTGVGDLASFYTSVGLAAQTRN
PFTDGNYYGVGLNMDWTTTLGTVSLVGGYRAANVRYVTTATSWQLREQQEPWQKSVELRL
ASPSAQPFQYVFGAYYLDTDMKARANGENAPRRNYSDQHTNLWGWTGALFSQLTYGFTDA
FRVTGGLRYTYEKKNSDSARYTLNNTVGPDPVIPDLPVGAPANIVRGSRDWNKVTWKAGV
EFDAGPRNFLYASVGTGFKAGGFFYGPVGSQTYEPEKVTSYTVGSKNRFLDNKLQLNIEA
FYSDYKDQQLSFVKLIGVSSTLVTENAGKSHAYGFELESEFLATPTTRLGTQIQYLKAKY
DSFSYLTLAAPPATSACKVTAGVPQATVNCDGQPPLRAPEWTINGSIEQSFPLANGGRFA
AEARGRYETEFQNDVSYVPETQGKPTARIDLSLSYQAPDNRWSIQGYVNNVTDVVTIASA
TMSNAYPNNQAVGIVLYAPRTFGVRGQVRF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggtggccaaacttggaacatcgtttctggcattgagcgtcgcgctctcgtcg
ccggcactggcgcagggcagcgcatcggccgaaatcgagaccggcgaacaggggcttcag
gatatcgtcgtaaccgcccagcgccgctcggagaatgtgcagcggacagccttgtctgtc
accgccgtcacgggcgaaaccatggtatcgcgcggtgtgagccaaaccgaggatctcagc
cgcctgaccgcgggcctgcaagtgcagccctcaggcggtccatacacgaccttcgctgtc
cgtggtgtcagccagctcggcggcaatgcctttgccgatcccaccgtcgcagtgaacctc
ggcggcgtctacctggcgacgcccacggtcatccacggactctatctcgatctcgatcgc
gtcgaaatccttaaaggcccacaaggaaccctctacggccgcaacgcgacggccggcgcc
atcaacgtcattccggtgcggcccaggttcgagtttgaaggaagccttgccgccgacgtc
ggcaactatgaccgcttcaacgcgaccggcgtactgaacatcccgatctcggacaatgtc
gccgtgcggatcgccgggcagcgcgtgcgccgtgacggcttcatgagcgacggcacgggc
gacgacaaaggcgaggctgtgcgcgcctcgttcctcgccgagccgaccgacaatttctcg
gtgctcatctcgttcgactgggcccatcagggcggaaaggggcctggggccacgctgcgc
aaaccatgcgctgcgctcggacggacaggcgtgagctgcttcgtcgccgatccctacacc
ggcgtcggcgatcttgcgagcttctacacgtccgttggcctcgccgcgcagacccgcaat
cccttcaccgacgggaattattacggcgtcggcctcaatatggactggacgaccacactc
ggtacggtgtcgctggttggtggctatcgcgccgccaatgtccgctacgtgacgacagcg
acgagctggcagttgcgcgagcagcaggagccctggcaaaaatccgttgagctgcgcctc
gcctcacccagcgcgcaacccttccaatatgtcttcggcgcctattatctcgacacggac
atgaaagcgcgtgccaatggcgagaatgcgccacgccgcaactatagcgaccaacacacc
aacctctggggctggaccggggcactcttctcgcagctcacctatggcttcaccgatgcg
tttcgcgtgaccggcggtctgcgctacacctacgagaagaagaatagcgacagcgcccgc
tacacgctcaacaacaccgtcggtccggatccggtcattcccgatctgccggtcggcgcg
ccggccaacatcgtccggggttcacgcgactggaacaaggtgacctggaaagccggcgtc
gagttcgacgcagggccgcgcaacttcctctatgccagcgtcggaaccggtttcaaggca
ggcggcttcttctatggtccggtcggctcgcagacctacgagcccgaaaaggtgacatcc
tatacggtgggatcgaagaaccggttcctcgacaacaagctgcagctcaacatcgaagcc
ttctactccgactacaaggaccagcagctttccttcgtgaagctgatcggcgtttcatcc
acactggtgacggagaatgccggcaagtcccacgcctatggcttcgaactggaaagcgag
tttctggcaacgccgaccacgcggctcggcacgcagatccagtatctcaaggcaaaatat
gacagcttctcctatctgacccttgctgcaccacccgccacgtccgcgtgcaaggtgacg
gcgggcgtccctcaggcgaccgtgaattgcgacgggcagccgccgctgcgcgcgccggaa
tggacgatcaacggcagcatcgagcagagttttccgctcgccaatggcggcaggttcgcc
gcagaggcgcggggccgctacgagacggagttccagaacgacgtttcctatgtgccagaa
acacaaggaaagccgactgcgcggatcgacctcagcctttcctatcaggcgccggacaat
cgctggtcgatccagggctatgtcaacaatgtgaccgatgttgtcacaatcgccagcgcc
acgatgagcaacgcttatcccaataatcaggcggtcggcatcgtcctctacgcgccgcgc
accttcggtgtccggggtcaggtgaggttttga
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