Sphingobium sp. SYK-6: SLG_14760
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Entry
SLG_14760 CDS
T01622
Name
(GenBank) putative P-loop-containing ATPase
KO
K06958
RNase adapter protein RapZ
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssy03019
]
SLG_14760
Messenger RNA biogenesis [BR:
ssy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SLG_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_30
AAA_28
AAA_33
T2SSE
Herpes_Helicase
AAA_16
ABC_tran
AAA_18
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAK66151
UniProt:
G2IRT5
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All DBs
Position
complement(1609051..1610007)
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AA seq
318 aa
AA seq
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MIPPPTPKSILIVTGLSGAGKSTSLRTLEDAGWETVDNLPLTMLDRLLAAPPPQGYAAGE
DRPLAIGIDSRTRGFAADTVLSVIASLRDQGRNQVEMLFLDCSGTVLERRYAETRRRHPL
APDRPAADGIARERELLEPLRRAAEHLIDSSDFTSNALQQAIRQRFAGSFESTLTLLSFG
FARGVPRNADLMFDMRFLRNPYWEDDLRHLGGLDAPVRDYVMADPLFEKAVGQIEALLGT
VLPRYSEDGKAYVTIAFGCTGGRHRSVCVTEEIGQRLRAAGFSPTIMHRNLESVQLDAYE
NRRQGKQTVIEGRGAKST
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattcccccgcccacccccaagtccatcctgatcgtcaccggcctttcgggcgccgga
aaatcgaccagtctgcgcaccctggaggatgcggggtgggaaacggtggacaatctcccg
ctcacgatgctggaccggctgctcgcggcccccccgccacagggctatgccgccggagag
gatcgcccgctcgccatcggcatcgacagccggacgcgcggctttgctgccgacaccgtc
ctgtccgtcatcgcctcgctgcgcgatcaggggcgtaatcaggtggagatgcttttcctg
gattgttcgggaaccgtgcttgaacggcgctatgccgagacccggcggcgccaccctctc
gcccccgatcgccctgcggcagacggcattgcccgggagcgcgaattgctggagcccctg
cgccgggccgcagagcatctcatcgacagcagcgacttcaccagcaatgcgcttcagcag
gcgatccggcagcgctttgccggcagcttcgaatccaccctcacgctgctgtcgttcggc
tttgcccggggcgtgccccgcaatgccgatctcatgttcgacatgcggttcctgagaaat
ccctattgggaggacgacctgcgccatctgggcgggcttgacgcaccagtgcgcgactat
gtgatggccgacccgttgttcgagaaagccgtcggccagatcgaagcgcttctcgggacc
gtccttccgcgctacagcgaggacggcaaggcttatgtgaccattgcgttcggctgtacc
ggggggagacatcggtccgtctgcgtgacggaggagatcggtcagcgcttgcgcgcggct
ggcttttcgcccaccatcatgcaccgcaatctggaatcggtgcagctggacgcctatgag
aaccggcgccaaggcaaacaaacggtaattgaagggcggggcgctaaatcgacatga
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