Sphingobium sp. SYK-6: SLG_16540
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Entry
SLG_16540 CDS
T01622
Name
(GenBank) putative ABC transporter substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLG_16540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_16540
Transporters [BR:
ssy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SLG_16540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6214
Troponin-I_N
DUF6381
Motif
Other DBs
NCBI-ProteinID:
BAK66329
UniProt:
G2ISG9
LinkDB
All DBs
Position
complement(1807442..1808872)
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AA seq
476 aa
AA seq
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MLALVSCGRGRGDDSAVQVDVIGVAEQTVNPLRDSVSPAAKAILGATAQGLLAYDARGEV
VSALAESWIVEDGGQSYIFRLRRTSWPDGEPVKADQVVRLLQERMRANPLSLAGLSPRLR
AMTDRVIEIRLDAPLPVFLQLLAQPQFAIFSRAGGTGPYRATLANGVIALEPMPAVTDPE
AEPEPAPAPILQRSLRVHRAALALVRYREGRTDLVLGGRFQHLPLVSAAGFEMRDLRADP
VTGLFGLAFVGKSDFLADLSVRDALSRTIDRERLAATLGPPGWRTAVFPLPGPLDLGRQP
SAPGWHDRPVEERVASARRVIEAWRAAHDDSDPPVLRIALPEGPGGSVLFIALARDLGQL
GVRLDRVALDASADLRLIDEVAPFDSALWYLSRLDCPARIACDPRATKLLSGAREASDPA
EQARLLAEAEALIVAHAGYIPLGQPVRWAMAARRLTGFQPSPRGIHPLNRLIAIPN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctcgtttcctgcggccgtggccggggcgatgacagtgccgtccaggtcgat
gtcatcggtgtggcggaacagacggtcaatccgctgcgcgacagcgtctcacccgccgcc
aaggccattctgggcgcgactgcgcagggcttgcttgcctatgacgcgcgcggcgaggtt
gtgagcgcgctcgcggagagctggatcgtcgaggatggcgggcagagctacatcttccgc
ctgaggcgtaccagctggccggatggcgagccggtaaaggcggatcaggtcgtccgcctg
ctgcaggagcggatgcgcgccaacccgctctcgctggcgggcctgagcccgcgcctgcgc
gccatgaccgaccgggtgatcgagatccggctggacgcgccgctcccggtcttcctgcaa
ctgctcgcacagccgcaattcgccattttctcgcgggccggcggcaccggcccctatcgc
gccacgcttgccaatggcgtcatcgcgctcgaaccgatgccggccgtgacggaccccgag
gctgagcccgagccggcccccgcgccgattctccagcgcagcctgcgagtccatcgcgcc
gccctggcccttgtccggtatcgcgagggcaggaccgatctcgtcctgggtggacgcttc
cagcatctgccgctcgtgtccgccgcgggcttcgagatgcgggatctgcgcgccgatccc
gtcaccggcctgttcggtctggcctttgtcggcaagtcggacttcctggcggatctgtcc
gtccgcgatgcgctctcgcgcacgatcgacagggagcggctggccgcgacgctggggcct
cccggctggcgcacggcggtcttccccctgcccggcccgctcgatctgggacggcagccc
agcgcccccggctggcatgatcgcccggtcgaggagcgcgtcgcctcggcgcgacgcgtg
atcgaggcgtggcgcgcagcccatgacgacagcgatccgccggtgctgcgcattgccctg
cccgagggccccggtggctcggtgctgttcatcgctcttgcgcgcgatctggggcagctt
ggcgtgcggctcgatcgggtagcgctggatgcctcggccgatctgcgcctcatcgacgag
gtcgcgccgttcgacagtgccttgtggtatctgagccggctcgattgcccggcccgcatc
gcctgcgatccccgcgcgaccaagctgctctcgggcgcgcgtgaggcgagcgatcctgcc
gagcaggcccgtctgctggccgaggcggaagcgctgatcgtggcccatgccggctatatc
ccgcttggccagcccgtccgctgggcaatggcggcgcgccgcctcaccggcttccagccc
tcgccgcgcggcatccatccattgaaccggctgatcgccatccccaattaa
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