Sphingobium sp. SYK-6: SLG_16560
Help
Entry
SLG_16560 CDS
T01622
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SLG_16560 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ssy03011
]
SLG_16560 (rpsA)
Ribosome [BR:
ssy03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SLG_16560 (rpsA)
Bacteria
SLG_16560 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
BAK66331
LinkDB
All DBs
Position
complement(1809830..1811533)
Genome browser
AA seq
567 aa
AA seq
DB search
MASTANPSRDDFAALLNESLGGADGGFEGRVVKGTVTGIENDLAVIDVGLKSEGRVPLRE
FAAPGQKADLKVGDEVEVFVDRVENSNGEAMLSRDRARREAAWDKLEAEFSESARVEGVI
FGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQTLSEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPS
EMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGAAAKYPIGAKLTGRVTNITEYGA
FVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVLVLEVDAEKRRISLGLKQAQSN
PWESFAERHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALNLHRKG
EVVQAVVLDVDVEKERISLGMKQLEKGAPTSGASRGGSGLNKNETVTVTVLEVRDGGLEV
QAGDDGVTGFIKRSDLGRDRDEQRPERFQPGQKFDALVIGFDRSKKPNFSVKALQIAEEK
AAVAQYGSSDSGASLGDILGEALKAKN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacggcaaacccctcgcgcgacgatttcgccgcgcttctcaatgaatctctc
ggcggcgccgacggcggctttgaaggccgcgtcgtcaagggcaccgtcaccggcatcgaa
aatgatctcgccgtcatcgacgtcggcctcaagagcgaaggccgcgtgccgctgcgcgag
ttcgccgcgccgggccagaaggccgatctgaaggtcggtgacgaagtcgaggtctttgtc
gaccgcgtcgagaacagcaatggcgaggccatgctcagccgcgaccgcgcccgccgcgaa
gccgcgtgggacaagctggaagccgagttctccgaaagcgcccgcgtcgaaggcgtcatc
ttcggccgcgtcaagggtggcttcaccgtcgatctcgacggcgccgtggcgttcctgccc
ggctcgcaggtcgatatccgcccggtccgcgacgtcacgccgctcatggacatcccccag
cctttccagatcctcaagatggatcgtcgccgcggcaacatcgtcgtgtcgcgtcgcgcc
atcctggaagagactcgcgccgagcagcgcagcggcctcatccagaccctgtcggaaggc
cagatcatcgacggcgtcgtcaagaacatcaccgattatggtgcgttcgttgacctgggc
ggcatcgacggcctgctgcacgtcacggatctgagctacaagcgcatcaaccacccgagc
gagatgatcaacatcggcgacaccgtccgtgtccagatcatccgcatcaatcgcgacaca
cagcgcatcagcctcggcatgaagcagctcgagagcgatccgtgggaaggcgccgccgcc
aagtatccgatcggcgcgaagctgaccggccgcgtcacgaacatcaccgaatatggtgcg
ttcgtcgagctggagccgggcatcgagggcctcgtccacgtctccgagatgagctggacc
aagaagaacgtccatcccggcaagatcgtctccacctcgcaggaagtggaagtgctcgtg
ctcgaggtcgatgccgagaagcgtcgcatctcgctgggcctcaagcaggcgcagtccaac
ccctgggagagcttcgccgagcgtcacccggtcggttcgacggtcgagggcgaagtcaag
aacgccaccgagttcggcctgttcatcggcctcgacggcgatgtggacggcatggtccac
atgtcggacatcgcctggggcatttccggcgaggacgcgctcaacctgcatcgcaagggc
gaggtcgttcaggccgtggtgctcgatgtcgatgtcgagaaggagcgtatcagcctcggc
atgaagcagcttgagaagggcgcgcccaccagcggtgcctcgcgcggcggctcgggcctc
aacaagaacgagaccgtcacggtcaccgtgcttgaggttcgcgacggcggcctggaagtg
caggcgggcgacgatggcgtcaccggcttcatcaagcgcagcgaccttggccgcgaccgc
gacgagcagcgtccggagcgtttccagcccggccagaagttcgacgccctggtcatcggc
ttcgatcgttcgaagaagccgaacttctcggtcaaggctctccagatcgccgaggaaaag
gcggcggtcgcgcagtatggttcgtccgacagcggtgcgtcgctgggcgacatcctgggc
gaggcgctgaaggccaagaactga
DBGET
integrated database retrieval system
