Sphingobium sp. SYK-6: SLG_16780
Help
Entry
SLG_16780 CDS
T01622
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_16780 (hup)
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_16780 (hup)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_16780 (hup)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLG_16780 (hup)
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SLG_16780 (hup)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SLG_16780 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_cement_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BAK66353
UniProt:
G2ISJ3
LinkDB
All DBs
Position
complement(1831941..1832216)
Genome browser
AA seq
91 aa
AA seq
DB search
MNNNDLADTIAAKHDLTKTDARAVVDAVFASIADAAAKGEEISLNGFGKFKVKDTPAREG
RNPSTGATIQIAASKKLSFAPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataacgatctcgccgataccattgccgccaagcacgatctcaccaagacggac
gcccgcgccgtcgtcgacgcggtgttcgcttcgatcgccgacgccgctgccaagggtgag
gaaatctcgctgaacggcttcggcaagttcaaggtcaaggacacgcccgctcgcgagggc
cgcaacccctccaccggcgccacgatccagatcgcggcttcgaagaagctgagcttcgcg
cctgccaaggccgtgaaggacaagctcaacggctga
DBGET
integrated database retrieval system
