Sphingobium sp. SYK-6: SLG_17050
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Entry
SLG_17050 CDS
T01622
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssy03000
]
SLG_17050
Transcription factors [BR:
ssy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SLG_17050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
BAK66380
UniProt:
G2ISM0
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Position
1862634..1863500
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AA seq
288 aa
AA seq
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MTLTQLRSFIAVARYNGFTAAARALRTSQTTITSQIQALEEEHGARLFERRGRRIDLTPV
GTEFLQIARQMIELENDAAILLKDSGALRQGAIKIGAVSPFHVIAMIEAFHSQYPDIYTS
MRLGNSGDVLTDLGNYAADVGVVARADDDDRYYMQHYASYPVTAFVHRDHRLAANGSIEL
AELSKERLLMRETGSTTRRALEDAMASIGRKPRIAMEIGSREAIREAVIRGLGIGTVSQS
EYVPDERLVPLPITGTAVVTHIYLCCLRERRRSLLISAFLNAVTRRTT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcacgcaacttcgcagtttcatcgcggtcgcgcgctacaacggcttcacggct
gctgcgcgcgccttgcgcacgagccagacgaccatcacgtcacagatccaggccctggag
gaagagcatggcgcgcgcctgttcgagcgacgggggcggcgcatcgacctgacgccggtc
ggcaccgaattcctgcagatcgcgcggcagatgatcgagctggagaatgacgccgcaatc
ctgctgaaggacagcggcgccctgcggcagggcgcgatcaagatcggcgcggtaagccct
ttccatgtgatcgccatgatcgaggcctttcacagccagtatccggacatctacacgtcc
atgaggctcggcaactcaggcgacgtcctcactgacctcggcaattacgcggcggacgtc
ggcgtcgtcgcccgggcggacgacgatgatcgctattatatgcagcattatgcgagctat
ccggtgacggccttcgtacatcgtgatcaccgcctggccgccaatggctcgatcgagctg
gccgagctctccaaggagcgtctgctgatgcgcgagaccggctccacgacgcgccgggcg
ctcgaggatgccatggcgtcgatcggccgcaagccgcgcatcgcgatggagatcggcagt
cgcgaggcgatccgcgaggccgtgatccgtggcctcggcatcggcaccgtctcgcaatcg
gaatatgtgccggacgagcggctggtgccgctccccatcacgggcaccgccgtcgtcacg
cacatctatctgtgctgccttcgggagcggcggcgcagcctgctgatctctgcatttctg
aatgccgtgacccggcggaccacctga
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