KEGG   Sphingobium sp. SYK-6: SLG_17380
Entry
SLG_17380         CDS       T01622                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ssy  Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ssy02048]
    SLG_17380
Enzymes [BR:ssy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SLG_17380
Prokaryotic defense system [BR:ssy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SLG_17380
SSDB
Motif
Pfam: DEAD ResIII Cas3-like_C_2 Cas3_HD PhoH HD Helicase_C AAA_22
Other DBs
NCBI-ProteinID: BAK66413
UniProt: G2ISQ3
LinkDB
Position
1907423..1909774
AA seq 783 aa
MIYAHSISSKSENTWEPLSHHLSSVSNCAEAFAERFGVGVLGRIMGALHDIGKCSAAYQH
YIRTPQQGDGRARGPDHSTAGAKEALRLYGVAGRLMAFGIAGHHSGLMDGPSLTERENKA
VEDYVGWEGQAPPLPDRRTWMASMTSPQPNAIEPAFRGFFLTRMLFSCLVDADFLETERF
YAVAEGRSPPERGGRIDRRHRDAVRTYMAKYRREDTPVNTLRSQILDHAVVKAALTPGLF
TLTVPTGGGKTLTSLSFAIEHALRHGLERIIYVIPFTSIIEQTAEVFRTALGAGLAGDVL
EHHSSFDWDARQPTEEGDEEGEGASGLAKLRRDAENWDVPIVVTTAVQFFESLFAARTSR
ARKLHNLAKSVIVIDEAQSIPVHLLRPCMAAIDELAKNYGASVVLCTATQPALRKQDDAL
PRPVRAPSDAGPERTDGLDIPDERELAPDPRGLYRRLRRVRVEWSQMPVPDAAIAARFAE
RPQMLCIVNSRAHARELFEAIRHQPGARHLTTLMCARHRRDVLASVRADLAAGQPVRLVA
TSLIEAGVDVSFPEVWRAAAGLSNIAQAAGRCNRSGELGPLGEAHGRTLVFEPEMVEGRR
PIPRDLMPFYDAAREVLKNPALDPLSLEGVTDYYRWLYWKKGYAALDQAKGTGSDYPILS
AIHETVGRGGVNCPFRTISDAFQMIDQAMDPVLIPYDADAEEALRVLVHADRPPAGTLRT
LQQYVVPVPKQIRAAMLANGDAAVVREDYGDRFVRLGDMFLYDRSLGLALSTPEWRASEQ
NIM
NT seq 2352 nt   +upstreamnt  +downstreamnt
gtgatttatgcccactcgatttccagtaaatcggagaacacctgggagcctctttctcac
catttaagcagcgtcagtaactgcgcggaagcatttgctgagcgtttcggagtaggggtt
cttggccgcattatgggggcgcttcacgatatcgggaagtgttcggcggcctaccagcac
tatattcgcacaccacagcagggtgatggaagggcgcgcggccccgaccacagcaccgcc
ggggcgaaggaagcgctgcgcctgtacggtgtggccggccgcctgatggccttcggtatc
gccggccaccacagtggcctgatggacggcccgagcctgactgaacgcgaaaacaaggcg
gtcgaggactatgtggggtgggaaggtcaggccccgccgctgcctgatcgacgcacatgg
atggcgagcatgacatcgccccaaccgaatgcgatcgaaccggcgttcaggggtttcttc
ctgacgcggatgctgttctcctgccttgttgatgccgattttctggagacggagcgcttc
tatgccgtcgccgagggccgttcaccgcccgagcgcggagggcggatcgaccggcgccac
cgcgacgccgtccgcacatacatggcgaagtaccggcgcgaagatacgccggtcaacacg
ctgcgctcgcagattctcgatcatgccgtggtaaaggccgcactgacgccgggtctgttc
acgcttactgtaccgacgggaggcggcaagacgcttacctcgcttagcttcgcaatagaa
catgcgctccggcatgggctggagcggatcatctacgtcatccccttcacgtcaatcatt
gagcagaccgccgaagtgttccgcaccgcgctgggggccggactggccggcgatgtgctg
gaacatcattccagcttcgactgggacgcgcgccagcccaccgaagagggcgacgaggaa
ggggagggcgccagcggcctcgccaagctgcgccgcgatgcagagaattgggacgtgccg
attgtggtgaccacggcggtgcagttcttcgaaagcctgtttgctgcccgcaccagccgc
gcgcgcaagctgcacaatctggcgaagagcgtgatcgtgatcgacgaggcgcaatcgatc
cccgtccatttattgcgcccgtgcatggcggctatcgacgaactggcgaagaattacggg
gcgagcgtggtgttgtgtactgcaacccagcctgcgctgcgaaagcaggacgacgcgttg
ccgcgaccagtaagggcgccatcggatgccggaccggaacggacagacggcctcgatatt
ccggatgaacgcgagttggcgcccgatccgcgcggattgtaccggagactgcggcgggtg
agagtcgaatggtcgcagatgccggtgcccgacgcggcgattgccgcccggtttgccgag
cgaccgcagatgctatgcattgtgaacagccgcgcccatgcacgggaattgttcgaggcg
atccgccaccagccgggcgcgcgccacctaaccacgctgatgtgtgcgcgtcaccgccgc
gacgtgctggcttcggtgcgcgccgatctggcggcgggccagccggtgcggctcgtagcg
accagcctgatcgaggcgggggtcgacgtgtcgttccccgaagtgtggcgcgccgccgcg
ggactctcgaacatcgcccaagcggccggacgctgcaaccgcagcggcgaactgggtccg
ttgggtgaggcccatggccggacgctggtgttcgaacccgaaatggtggagggccgccgc
ccgatcccgcgcgacctcatgcccttttacgatgcggcgcgggaggtgctgaaaaaccca
gcgctcgatccgcttagcctggagggcgtgaccgactattatcgatggctgtactggaaa
aagggatatgccgcgctcgatcaggcgaaagggaccgggagcgactatccgatcctctcc
gcgatccacgagacggtaggcagaggcggggtcaactgtccgttccgcaccatttcggat
gccttccagatgatcgaccaggcgatggacccggtgctgatcccgtatgacgcggatgcg
gaggaggccttgcgcgtgctcgtccatgccgatcgcccgccggcgggcacgctgcggacg
ctccagcaatatgtggtgccagtgcccaaacagatccgcgcggcgatgttggcgaacggt
gacgcggcggtagtgcgcgaggactatggcgaccggttcgtacggttgggtgacatgttc
ctgtatgaccgcagtctgggcttagcgctttctaccccggaatggcgcgcatcggagcag
aacatcatgtga

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