Sphingobium sp. SYK-6: SLG_17660
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Entry
SLG_17660 CDS
T01622
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_17660 (phr)
Enzymes [BR:
ssy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SLG_17660 (phr)
DNA repair and recombination proteins [BR:
ssy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SLG_17660 (phr)
Prokaryotic type
SLG_17660 (phr)
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Paralog
Gene cluster
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAK66441
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Position
1937165..1938541
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AA seq
458 aa
AA seq
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MTEPVILWLRRDLRLGDQAALLAACAEGPVVPVYVLDDETPDHRRMGAASRWWLHGSLAS
LAGDLRASGSRLVLRRGRADEVLPALAREVGARRVHALHHYEPWWRNAERAIARVLDLVL
HDGNYLHPPGLLKSGSGSPYRIFTPFWRALRETMPPPEPMARPDKIPAPSSWPASEHLDD
WSLRPSSPDWATGMARAWQPGEQGALDRLEAFADSAGDYDIARNLPSVEGSSRLSPHLHF
GEISPSLIWHRIARRDGRTEPYLRELAWRDYAQTVILQHPRHGSANGRAQFDDFPWRDLR
EAASDFEAWKRGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLVKHLLIDWRHGEQWFW
DTLIDADYGNNSVNWQWVAGTGIDSSMFVRIMAPLGQSAKFDAADYIRRWVPELAGLPDG
VVHDPESHGFRPSGYPVRIIDHRAARERALSAYAAIRA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacggagccggtcatcctctggctgcgccgcgacctgcggctgggcgatcaggctgcc
ctgctcgcggcctgcgcggaagggccggtcgtgccggtctatgtgctggacgacgagacg
ccggaccatcgacgcatgggtgcagcatcccgctggtggctgcatgggagcctcgccagc
ctcgcaggcgatctgcgcgcctccggctcgcgcctcgtgcttcgccggggacgcgcggac
gaagtgctgccggcgctcgcgcgggaagtgggcgcgcggcgcgtccatgccctgcaccat
tatgagccctggtggcgcaatgcggaacgggcgattgcgcgcgtgctcgacctcgtgctg
catgatggaaactatcttcacccgccgggcctgctgaagtccggcagcggcagcccctat
cgcatcttcacgcccttctggcgggcactgcgggagacgatgccgccgccggaacccatg
gcccggcctgacaaaatccccgcgccctcctcatggccggcgagtgagcatctcgacgac
tggtcgctgcgcccgtccagccccgactgggcgaccggcatggcgcgggcgtggcaaccg
ggcgagcaaggcgcgctcgaccggctcgaggcttttgcggatagtgccggggactatgac
atcgcgaggaacctgccgtcggtggagggcagttcgcgcctgtcgccgcacctgcatttc
ggcgagatttcgccgtccctcatctggcatcgcattgcccggcgcgatggacggaccgag
ccctatctgcgggaactggcctggcgcgactatgcgcagacggtgatcctccagcatccc
cgtcatggtagcgccaacggcagggcgcagttcgacgattttccgtggcgggacctgcgc
gaagctgccagcgacttcgaagcctggaagcggggccgcaccggctatcccatcgtggac
gcgggcatgcgccagctctggacgacgggctggatgcacaaccgcgtgcgcatgatcgcg
gcgagcttcctggtgaagcatcttctcatcgactggcgccatggggaacagtggttctgg
gatacgctgatcgatgccgattacggcaacaatagcgtcaactggcagtgggtagcgggc
accgggatcgattccagcatgttcgtccggatcatggcgccactgggccaatcggccaag
ttcgacgccgcggattatatccgccgctgggtgcccgaacttgcagggctgccggatgga
gtggtccacgatcccgaaagccatgggttccggccatcgggctatcccgtcaggatcatc
gaccatcgcgccgcccgcgagcgcgcgctttccgcttacgccgccatccgggcgtga
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