Sphingobium sp. SYK-6: SLG_17710
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Entry
SLG_17710 CDS
T01622
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_17710 (radA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SLG_17710 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
AAA_22
DnaB_C
AAA_16
RecA
AAA
MeaB
AAA_30
nSTAND3
DUF7125
AAA_5
GvpD_P-loop
NTPase_1
ABC_tran
CbiA
AAA_14
Glyco_hydro2_C5
DUF7129
SLFN-g3_helicase
AAA_29
ATPase_2
Zn_ribbon_6
NACHT
DAP3
Motif
Other DBs
NCBI-ProteinID:
BAK66446
UniProt:
G2IST6
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All DBs
Position
1943647..1945014
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AA seq
455 aa
AA seq
DB search
MVKLKRRYVCQACGSLATRWQGQCDDCGEWNTLVEEAAPTAFSVRHDLQDGGRAISLVGL
DSDVALPERLGTGLAEFDRALGGGLVAGSATLIGGDPGIGKSTLLLQAAASLARAGRGVV
YVSGEEAADQVRLRARRLGLGDAPVQLASATSVRDILTTLGRGRAPDLLVIDSIQTMHSD
TIEGAPGTVSQVRASAQELVRFAKKGGAALILVGHVTKDGTIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMAGEGLQEVANPSLLFLTERDERVAGTAVFPAIE
GTRPVLVEIQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSACEVYLNVSG
GYRLQDPAADLAVASALISALSERPVQQDAVVMGEIALSGEVRPVAHAALRLRESAKLGF
RRALVPSSAAKQAKELSVSGFTQLSDLVDHMLGRD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagctcaaacgccgatatgtctgccaggcttgcgggtcgctggccacgcgctgg
cagggacaatgcgacgattgcggggaatggaacacgctggtcgaggaagctgcgcccacg
gctttctcggtccggcacgatctgcaggatggcgggcgcgccatctcgctggtcgggctg
gacagcgacgtggccctgcccgagcgactcggcaccggccttgccgaattcgacagggcg
ctggggggaggcctcgtagccggatcggccacgctgatcggcggtgatcccggcatcggc
aagtcgacactgctgctgcaggccgctgccagtctcgcccgcgcggggcgcggcgtcgtg
tacgtgagcggggaggaagcggccgatcaggtgcggctgcgggcgcgccggctcggcctt
ggcgatgcgcccgtgcagctcgccagcgcgacatccgtgcgcgatattctcaccacgctg
gggcgggggcgcgcgccggatctgctcgtcatcgattccatccagacaatgcacagcgac
acgatcgagggcgcgccgggcacggtgagccaggtccgcgcttcggcgcaggaactcgtg
cgcttcgccaagaagggcggggccgcgctcatcctggtggggcatgtcaccaaggacggc
acgatcgcgggaccgcgcgtgctcgaacacatggtcgacacggtgctcagcttcgagggt
gagcgcagccatcaatatcgcatcctgagggcgatcaagaaccggttcggcggcaccgac
gaaatcggtgtcttcgccatggccggcgaagggctccaggaagtcgccaatccttccctg
cttttcctcaccgagcgggacgaacgcgtggccggcactgcggtcttccccgccatcgag
gggacgcggccggtgcttgtggaaatccaggcccttacggtgcggcttgccagcggcgcc
acgccccggcgcgccgtggtgggctgggacagcggtcgcctcgccatgatcctcgccgtg
ctggaggcgcgttgcggactcagcttctccgcctgcgaagtctatctcaacgtctcgggc
ggctaccgcctgcaggatccggccgccgacctcgcggtggccagcgccctcatctccgcg
ctctccgagcgacccgtgcagcaggacgccgtggtgatgggtgaaatcgcgctctccggc
gaggtgaggcccgtggcgcatgccgcgctgcgcctgcgcgaatcggccaagctcggcttc
cggcgcgcgctcgttccgtcgagcgcggcaaagcaggccaaggaactctccgtgagcggc
ttcacgcagctcagcgaccttgttgaccatatgcttgggcgggactag
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