Sphingobium sp. SYK-6: SLG_18970
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Entry
SLG_18970 CDS
T01622
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00010
Glycolysis / Gluconeogenesis
ssy00020
Citrate cycle (TCA cycle)
ssy00620
Pyruvate metabolism
ssy00785
Lipoic acid metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
ssy01210
2-Oxocarboxylic acid metabolism
Module
ssy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SLG_18970 (pdhB)
00020 Citrate cycle (TCA cycle)
SLG_18970 (pdhB)
00620 Pyruvate metabolism
SLG_18970 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SLG_18970 (pdhB)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
SLG_18970 (pdhB)
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
RnfC_N
Transketolase_C_1
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
BAK66572
UniProt:
G2IT62
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All DBs
Position
2093092..2094480
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AA seq
462 aa
AA seq
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MGIEIKMPALSPTMEEGTLAKWLVKEGDEVRSGDILAEIETDKATMEFEAVDEGKIGKIV
VAEGTEGVKVGTVLAEMAGEGGESAKAAPKAEESAPPAKSDAAPEASKKAESGTTKLATQ
AQATIADPDLPEGTEYVKTTVREALRDAMAEEMRADERVFVMGEEVAEYQGAYKVTQGLL
EEFGARRVIDTPITEYGFAGIGAGAAMGGLKPIVEFMTFNFAMQAIDHIINSAAKTNYMS
GGQMRCPIVFRGPNGAASRVGAQHSQNYGPWYAAVPGLIVIAPYDSADAKGLLKAAIRCP
DPVVFLENELLYGRSFEVPKLDDYVLPIGKARIMREGKDVTLVSYSIGVGVALEAAEALA
GEGIEAEVIDLRTLRPLDTATVLQSLRKTNRLVVVEEGWPVCSIASEIAAVVMEQGFDDL
DAPVLRVTNEDVPLPYAANLEKAALIDAGRVVEAVKSVSYRK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgaaatcaagatgccggcgctgtcgccgactatggaggaaggcacgctggcc
aagtggctggtgaaggaaggcgatgaggtgcggtccggcgacatattggccgagattgag
accgacaaggcgacgatggaattcgaagcagtcgatgaaggcaagattggcaagatcgtc
gtggccgaagggaccgaaggggtgaaggttggaaccgtcctcgccgaaatggcgggcgag
ggcggcgaaagcgcaaaagccgcgcccaaggcggaggagagcgcgccgcctgccaaatcc
gatgccgcgcctgaagcgtcgaagaaggcggaaagcggcacaaccaaactcgccacgcag
gcgcaggcgaccattgccgacccggacctgcccgaaggcactgaatatgtgaagacgacg
gtgcgtgaggcgctgcgcgacgcgatggcggaggaaatgcgcgcggacgagcgcgtcttc
gtgatgggcgaggaagtggccgaatatcagggcgcctacaaggtgactcagggcctgctg
gaggagttcggcgccaggcgcgtaatcgacacgccgatcaccgaatatggctttgccggt
atcggtgcgggtgcggcgatgggcggcctgaagcccattgtcgagttcatgacgttcaac
ttcgccatgcaggctatcgaccacatcatcaactcggcggccaagactaattatatgtcc
ggcggccagatgcgctgccccatcgtgttccgcggccccaatggcgccgcgagtcgcgtg
ggcgcgcagcacagccagaactatggcccctggtacgcggcggtgcccggcctgatcgtg
atcgcgccctatgactcggccgatgcgaagggcctgctgaaggcggcgatccgctgcccc
gatccggtggtgttcctagagaacgagcttctctatggccgcagcttcgaagtgcccaag
ctggacgactacgtcctgccgatcggcaaggcgcggatcatgcgcgagggcaaggacgtg
acgctggtcagctattcgatcggcgtgggcgtggcgctggaagcggccgaagcgctggcg
ggcgaggggatcgaggcggaggtcatcgacctgcgcacgctccgcccgctcgacaccgcg
acggtgctccagagcctcaggaagaccaaccgcctggtggtggtcgaggaaggctggccg
gtctgctcgatcgcttccgaaatcgctgcggtggtgatggaacagggcttcgacgacctc
gacgccccggtgctgcgcgtcaccaacgaggacgtgccgctgccctatgccgcgaacctc
gaaaaagccgcactcatcgacgccggacgcgtcgtcgaggcggtcaaaagcgtatcctac
aggaagtga
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