Sphingobium sp. SYK-6: SLG_20240
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Entry
SLG_20240 CDS
T01622
Symbol
tmk
Name
(GenBank) thymidylate kinase
KO
K00943
dTMP kinase [EC:
2.7.4.9
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00240
Pyrimidine metabolism
ssy01100
Metabolic pathways
ssy01232
Nucleotide metabolism
Module
ssy_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SLG_20240 (tmk)
Enzymes [BR:
ssy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.9 dTMP kinase
SLG_20240 (tmk)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thymidylate_kin
AAA_28
AAA_22
CbiA
ParA
AAA_16
NACHT
AAA_33
AAA_25
MeaB
AAA_5
nSTAND3
AAA_18
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAK66699
UniProt:
G2ITI9
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All DBs
Position
complement(2221275..2221904)
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AA seq
209 aa
AA seq
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MPRGRFISLEGGEGVGKSTQARRLATALQRRGLDVVLTREPGGSEGAEAIRGLLLSGAAD
RWTIRSEALLFAAARADHVARTIRPALEAGQWVICDRFLDSSRAYQGVGGVLADAEILAL
HDVGSEGLLPDRTLLLRLPLGESSARASLRDEGEADRIGGRETMFHRAVAEAFERFADAE
PARFRRIDADGTPEAVEARLCAALADWLV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggccgcttcatttcgctggagggcggcgagggcgtcggcaagtcgactcag
gcgcggcgcctcgcgacagccctgcagcggcgcgggctggacgtggtgctgacgcgcgag
ccgggcgggagcgaaggcgccgaagccattcgcggcctgctgctttccggcgcggcggac
cgctggacgatccgctccgaagccctgctgttcgcggcggcgcgcgccgaccatgtggcg
cgcaccatccgcccggcgctggaggcgggccaatgggtgatctgcgaccgtttcctggac
agcagtcgggcctatcagggggtgggcggcgtccttgccgatgccgagatactggcactg
catgacgtcggctcggaaggcctgctgccggaccgcacgctgttgctgcgcctgccgctg
ggcgagagcagcgcgcgcgccagcctgcgggacgagggcgaggcggacaggatcggcggg
cgcgaaaccatgttccaccgggcggtggccgaagctttcgagcgcttcgccgatgccgag
ccggcgcgctttcgccgcatcgatgccgatggaacgcccgaggcagtcgaggcgcggctg
tgcgcggcattggcggactggctggtgtga
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