Sphingobium sp. SYK-6: SLG_20440
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Entry
SLG_20440 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_20440
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_20440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
EAR
3A
Motif
Other DBs
NCBI-ProteinID:
BAK66719
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All DBs
Position
2242433..2244799
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AA seq
788 aa
AA seq
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MSKAHFLKNCANPFALAAMACSGLAFGMPLHAQTAGDSASDDDAAAIVVTARRREERLVD
VPIAVTTFSGADLEKRGALDITDLGSTTPNITMEVSRGTNSTLSAFIRGVGQQDPVSGFE
QGVGIYLDDVYLNRPQAAVLDIYDVERIEVLRGPQGTLYGRNTIGGAVKYVTKLLPQDFS
LRVKGTYGSYDQADGIVTVSGPLGDIVRVGASVARLSRGGFGTNLTNGLENYNKDIWAGR
GTLEIGGYGEPVLIRISGDYTKDDSNPRGGHRLIPSRVSGAPVLDDVFDTRGALNDPKQF
VEAYGLAANVSADLGSGFTFRSITGWRKDDSASPIDFDALAAIDVDVPAFYRNEQFSQEL
QILYDNDGPLTGLIGGYYLSAKADTQFDVRLFTTLAGLTAFTEANVDTETFAVFADFSYD
ITDQLSLSLGGRYTWDTRRAGILRQNYLGGGSPVFGGAGVPLGAPSTNFNGERDFNKFTP
RVSLSFQPDRDHNIYASFSQGFKGGGFDPRGVGVNAPTTNPSGVPSEAEVAAYLSFRPET
VDSYEIGYKGNLLDGAVYLALAAFRMDYKDVQIPGSAGCTVGGIPTFCGIITNAGKARFQ
GIEAETNVRLARSFMTAGDRLTFAGSLGYIDAKYKEYITQIAGVGPVDVADFRKVQNTPR
WTASGTLAYVTPIGDGDLNLSSTVSWRGRTYQFEIPNPYIDQSNYALWDASLVYTAPDDR
WSIGVHGKNLTDKRYKTSGYTFVAADPRTGALIRNANGNLTPTLGTEGTLTAFYGNPRQV
FVTATLGF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaggctcattttctcaagaattgcgcgaatccgtttgctctggcagcgatggcc
tgttccggtcttgcctttggcatgccccttcacgcccagaccgcgggcgacagcgcctcg
gacgatgatgctgctgcaatcgtcgtgacggcccgccgccgcgaagaacgtctcgtcgat
gttcccatcgccgtcaccaccttcagcggtgcggatctcgagaagcgcggcgcgctcgac
atcacggatctcggcagcacgacgcccaacatcaccatggaagtgtcgcgcggcaccaat
tccaccctctccgccttcattcgcggcgtcggccagcaggacccggtgtccggcttcgaa
cagggcgtcggcatctatctcgatgatgtctatctcaatcgcccgcaggcggccgtgctg
gacatctatgacgtcgagcgcatcgaggtgctgcgcgggccgcagggcacgctctacggg
cgcaacaccatcggcggtgccgtcaaatatgtgaccaagctcctgccgcaggatttctct
ctgcgcgtgaagggcacttatggcagctacgatcaggctgacggcatcgttacggtgtcc
ggtccgctcggcgacatcgtgcgcgtcggcgcttcggttgcgcgcttgtcgcgcggcggc
ttcggcacgaacctcaccaacggcctcgagaactacaacaaggatatctgggcgggacgc
gggacgctggaaatcggcggctatggcgagcccgtgctgatccgcatctccggcgactat
accaaggacgacagcaatccgcgcggcggtcatcgcctgatcccgagccgcgtatccggc
gcgccggttctcgatgatgtgttcgacacgcgcggcgcgctcaatgatcccaagcagttt
gtcgaggcttacggccttgccgcgaatgtctcggcggatcttggttcgggcttcaccttc
cgctcgatcaccggctggcgcaaggatgacagcgcctcgcccatcgatttcgatgcgctc
gcggcgatcgatgtggacgtgccggcattctaccgcaacgagcagttcagccaggaactg
cagatcctgtatgataatgacggcccgctaaccggcctcattggcggctattatctgagc
gcgaaggcggacacgcagttcgacgtgcgcctgttcacgacgctggccggcctgaccgct
ttcaccgaagccaatgtcgacaccgagaccttcgccgtcttcgccgacttcagctacgac
atcacggatcagctcagcctctcgctgggcggccgctatacctgggatacgcgcagggca
ggcatcctgcgccagaattatctcggcggcggctcgccggtcttcggcggcgcgggcgtg
ccgctcggtgctcccagcaccaatttcaacggcgagcgggatttcaacaagttcaccccg
cgcgtctcgctcagcttccagcccgaccgggatcacaatatctacgcaagcttctcgcag
ggcttcaagggcggcgggttcgatccgcgtggtgtcggtgtgaacgcaccgacgaccaac
cccagcggcgtgccgagcgaagccgaagtcgccgcctatctgagcttccgtccggagacg
gtggacagctacgagatcggctacaagggcaatctgctcgatggcgcggtctatctcgcg
ctcgccgccttccgcatggactacaaggacgtgcagatccccggttcggcgggttgcacc
gttggcggcatccccaccttctgcgggatcatcaccaatgccggcaaggcgcgcttccag
ggcatcgaggcggaaaccaatgtccgccttgcccgcagcttcatgaccgctggcgaccgg
ctgaccttcgccgggtcgcttggttatatcgatgccaagtacaaggagtatatcacgcag
atcgcaggcgtcggccccgtcgacgtcgcggatttccgcaaggtgcagaacacgccccgg
tggaccgccagcggcacgctcgcttacgtgacgccgatcggcgatggcgatctgaacctc
agctccaccgtttcatggcgcggccggacctaccagttcgagatccccaacccctatatc
gaccagtcgaactatgcgctgtgggatgcgagccttgtctataccgcgccggacgatcgc
tggagcatcggcgtccatggcaagaacctgacggacaagcgctacaagacgtccggctac
accttcgtggcggccgatccccgcaccggtgcgctgatcaggaatgccaacggaaatctg
acgccgacgcttggcacggaaggcaccttgaccgctttctacggcaacccgcgccaggtc
ttcgtgacagcgacgctgggcttctga
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