Sphingobium sp. SYK-6: SLG_21380
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Entry
SLG_21380 CDS
T01622
Symbol
fadJ
Name
(GenBank) fatty oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00071
Fatty acid degradation
ssy00280
Valine, leucine and isoleucine degradation
ssy00310
Lysine degradation
ssy00362
Benzoate degradation
ssy00380
Tryptophan metabolism
ssy00410
beta-Alanine metabolism
ssy00640
Propanoate metabolism
ssy00650
Butanoate metabolism
ssy00907
Pinene, camphor and geraniol degradation
ssy00930
Caprolactam degradation
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
ssy01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SLG_21380 (fadJ)
00650 Butanoate metabolism
SLG_21380 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SLG_21380 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SLG_21380 (fadJ)
00310 Lysine degradation
SLG_21380 (fadJ)
00380 Tryptophan metabolism
SLG_21380 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SLG_21380 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SLG_21380 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SLG_21380 (fadJ)
00930 Caprolactam degradation
SLG_21380 (fadJ)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SLG_21380 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SLG_21380 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SLG_21380 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
F420_oxidored
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
FAD_binding_3
Pyr_redox_2
2-Hacid_dh_C
XdhC_C
AlaDh_PNT_C
UDPG_MGDP_dh_N
Epimerase
Shikimate_DH
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BAK66813
UniProt:
G2IHP0
LinkDB
All DBs
Position
2338837..2341032
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AA seq
731 aa
AA seq
DB search
MATTLSLEVDGDGIALVTIDVPGQSMNVITPDFFDDLAGAITRIAEDEAVKGAVISSGKA
SGFMAGMDLKYLGKMLQDAQSDGGAGDDANMGQLFESVFRLNALLRRLETCGKPVAAAIE
GTCMGGGLELALACHRRVLTSDPRVTIGLPEILVGLFPGGGGSQRLPRLVGIQGALMYML
QGKSWRPAEALGMKVVDELAEPGKAIEAARAWVKANPGAHTQPWDVKGFKVPGGSGQFNP
GFIQTMMAATVMTTKTTQRNMNAPHALLSAVYEGIQLPMDKAIRVESKYFAKVVADPQAG
NMVRTLFVSKQAAERGARRPAGVEKAPTKKLAMLGAGMMGAGIANVAAQAGIEVVLLDRD
QAAADKGKAHAQAQMQKRLGRGMTPEKMEAALARITPVTDAAALKGCDFVIEAVFEDPAI
KAEITQRVEAVLGPDMIFGSNTSTLPITSLAKAWTKPENFIGVHFFSPVEKMPLVEIIMG
KQTGDAALAKALDFVAQIRKTPIVVNDSRGFYTSRCFGTYVQEGTQMLAEGINPALIENV
GRQLGMPVGPLAVSDEVSIELGHKVTVATKAALGDAYVPSLADDVAAHMVALGRLGRKNG
KGYYDYPADGGRKSLWPGLAAEYPLALMQPSPQAVRERLLYRQLVECARCFAEGVLVTPQ
DGDIGAIFGWGFAPYTGGPFSAIDTISPAKVVEVLDRLTAAHGERFAPPAQLREMATSGA
TYYGKAGARAA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggccactaccctctccctggaggtcgacggcgacggcatcgcgctggtcacgatcgac
gtgcccggccagtcgatgaatgtcatcacgccggatttcttcgacgatcttgccggcgcg
atcacgcgcatcgccgaggacgaggccgtcaagggcgccgtcatcagctccggaaaggcc
agcggcttcatggccggcatggacctcaaatatctcggcaagatgcttcaggatgcccaa
tcggacggcggcgcaggtgatgacgcgaacatgggccagctcttcgagagcgtgttccgc
ctcaatgcgctgctgcgtcggctggagacctgcggcaagccggtcgccgccgctatcgag
ggcacctgcatgggcggcggcctggaactggcgctggcttgccatcgccgggttctgacc
agcgatccacgcgtgacgatcggcctcccggaaatcctggtcggcctcttccccggcggc
ggcggctcgcagcgcctgccgcgtctcgtcggcatccagggcgccctcatgtacatgctg
cagggcaagagctggcgcccggccgaggcgctcggcatgaaagtggtcgacgagctggcc
gagcccggcaaggccatcgaggcggcccgggcatgggtgaaggccaatcctggcgcgcat
acccagccctgggacgtgaagggcttcaaggtcccgggcggatcgggccagttcaatccc
ggcttcatccagacgatgatggccgcgaccgtgatgaccaccaagaccacgcagcggaac
atgaacgcgccgcacgcgctgctctcggcggtctatgagggcatccagcttcccatggac
aaggcgatccgggtggaaagcaaatatttcgccaaggtggtggccgatccgcaggccggc
aacatggtgcgcacgctgttcgtctccaagcaggcggccgagcgcggcgctcgtcgcccg
gccggtgtcgagaaggcgccgacgaagaagctcgccatgctcggcgcgggcatgatgggc
gcgggcatcgcgaatgtcgccgcgcaggcggggatcgaggtcgtgctgctggaccgcgat
caggcggccgcggacaagggcaaggcccatgcgcaggcgcagatgcagaagcgtctcggc
cggggcatgacgcccgagaagatggaagcggcgctcgcccgcatcacgccggtcacggat
gccgcggcgctcaagggctgcgatttcgtcatcgaggcggtgttcgaggatccggcgatc
aaggcggagatcacgcagcgcgtggaagccgtgctgggcccggacatgatcttcggctcc
aatacttcaaccctgccgataacatcgctggccaaggcatggacaaaaccggagaatttc
atcggcgtccacttcttctccccggtcgagaagatgccgttggtggaaatcatcatgggc
aagcagaccggcgatgcggcgctcgccaaggcgctcgatttcgtcgcgcagatccgcaag
acgcccatcgtggtgaatgactcgcgcggcttctacacgtcccgctgcttcggcacttat
gtgcaggaaggcacgcagatgctggcggaagggatcaatcccgcgctgatcgagaatgtc
ggccggcagctcggcatgccggtggggccgctcgcggtctcggacgaagtgtccatcgag
ctgggccacaaggtgaccgtggcgacgaaggccgcgctgggcgatgcctatgtgccgagc
cttgccgacgatgtggccgcgcacatggtcgcgctggggcggctcggccgcaagaacggc
aagggctattatgactatccggccgatggcggccgcaagtcgctctggccgggccttgcc
gctgaatatcccctcgccctcatgcagccctctccacaggcggtgcgcgagcgcctgctc
tatcgccagctcgtcgagtgcgcgcgctgctttgccgagggcgtgctggtgacgccgcag
gatggcgacatcggcgccattttcggctggggcttcgcgccttataccggcgggccattc
agcgcgatcgacacgattagcccggcgaaggtcgtcgaggtgctggaccggctgacagcg
gcccatggcgagcgcttcgccccgccggcccagttgcgcgagatggcgacgagcggcgcc
acttattatggcaaggcgggcgctagggcggcttga
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