Sphingobium sp. SYK-6: SLG_22620
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Entry
SLG_22620 CDS
T01622
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLG_22620 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_22620 (rnhB)
Enzymes [BR:
ssy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SLG_22620 (rnhB)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SLG_22620 (rnhB)
Elongation factors (archaeal)
SLG_22620 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
BAK66937
UniProt:
G2II14
LinkDB
All DBs
Position
complement(2445305..2445886)
Genome browser
AA seq
193 aa
AA seq
DB search
MIAGVDEAGRGPLAGPVVAAAVILCKPRPAGLDDSKKLSAARRAELEATIKRRCHWAIGV
VDVAEIDQLNIFGATMLAMTLAVEALCARIGCDPLEVLIDGNLTPHGRRPEWRWSARPIV
GGDALEPCISAASIIAKEHRDALMREAALAHPQYGWERNKGYGTPDHLAALRAHGPSPLH
RRSFTPVAQMALA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgggcgtggacgaagccggccggggtccgctcgccggcccggtcgtggcagca
gcggtgattctgtgcaagccccgcccggcgggtctcgatgacagcaagaagctgagcgcg
gcgcgccgcgcggaactggaagcgaccatcaagcggcgatgccactgggccatcggcgtg
gtcgacgtggcggagatcgaccagctcaacatcttcggcgcgaccatgctggcgatgacg
ctcgccgtggaggcactgtgcgcccgcatcggctgcgatccgcttgaagtgctcatcgat
ggcaatctgacgcctcatggtcgccgtcctgaatggcgctggagcgcacgcccgatcgtc
gggggagatgcgctcgaaccctgcatctccgccgcgtccatcatcgcgaaggaacatcgc
gatgcgctgatgcgcgaggcggctctggcccatccgcaatatggctgggagcgcaacaag
ggctatggcacgcccgatcatctcgccgccctgcgtgcgcatggtcccagcccgctgcat
cgacgcagcttcacgcccgtcgcgcagatggcgctggcctga
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