KEGG   Sphingobium sp. SYK-6: SLG_23450
Entry
SLG_23450         CDS       T01622                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00300  Lysine biosynthesis
ssy00470  D-Amino acid metabolism
ssy01100  Metabolic pathways
ssy01110  Biosynthesis of secondary metabolites
ssy01120  Microbial metabolism in diverse environments
ssy01230  Biosynthesis of amino acids
Module
ssy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SLG_23450 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SLG_23450 (dapF)
Enzymes [BR:ssy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SLG_23450 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: BAK67020
LinkDB
Position
2526611..2527438
AA seq 275 aa
MSQNAPLPFAKMHGLGNDFVVIDTRETPVAMDAPLARAIADRKTGVGCDQLILIGASDRA
DVSMRIFNQDGSEVEACGNATRCVPLFTGRDVTIETKAGLLHAARIGGLVSVDMGEPRFG
WEDIPLAYAMDTLAMPASWDELPPPAAVNVGNPHVVFFLDDPARVDMARLGPLIETDPLF
PRRVNVNFAHLVDDDHIRLTVWERGAGFTRACGTGACATAVAAIRRKLAHGPVRVTLEGG
DLLIDWTPGGHITMTGPAVHVFDGVLDPGSFPATP
NT seq 828 nt   +upstreamnt  +downstreamnt
atgtcgcaaaacgctcccctgcccttcgccaagatgcatggcctcggcaatgatttcgtc
gtgatcgacacgcgcgagacgccggtcgccatggacgcgccgctggcgcgggccattgcg
gacaggaagacgggcgtgggatgcgatcagctcatcctcatcggcgcctcggaccgcgcg
gatgtgagcatgcgcatcttcaatcaggacggcagcgaagtggaggcctgcggcaacgcc
acgcgctgcgtgccgctgttcactggccgggacgtgacgatcgagaccaaggcggggctg
ctgcatgcggcgcgcatcggcgggctggtgagcgtcgacatgggcgagccgcgcttcggc
tgggaggacatcccgctcgcttatgccatggacacgcttgccatgccggcaagctgggac
gagctgcccccgccggccgccgtgaatgtcggcaatccgcatgtcgtcttcttcctcgac
gatcccgcgcgcgtcgacatggcccggctcggcccgctcatcgagaccgatccactgttc
ccgcgccgcgtgaacgtcaatttcgcgcatctcgtggatgacgaccatatccgcctcacc
gtgtgggagcgtggcgcgggcttcacgcgggcctgcggcacgggcgcctgcgccaccgcc
gtcgccgccattcgccgcaagcttgcgcacggcccggtgcgcgtgacgctcgaaggcggc
gacctgctcatcgactggacgccgggcggtcacatcacgatgacaggccctgccgtccat
gtgttcgacggcgtgctggacccgggcagcttccctgccacgccatga

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