Sphingobium sp. SYK-6: SLG_23850
Help
Entry
SLG_23850 CDS
T01622
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02024
Quorum sensing
ssy03060
Protein export
ssy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SLG_23850 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SLG_23850 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLG_23850 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssy02044
]
SLG_23850 (ffh)
Enzymes [BR:
ssy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SLG_23850 (ffh)
Secretion system [BR:
ssy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SLG_23850 (ffh)
Eukaryotic Sec-SRP protein
SLG_23850 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_33
AAA_31
YqeC
ArsA_ATPase
GTP_EFTU
ResIII
Thymidylate_kin
AAA_16
AAA_17
APS_kinase
AAA_19
AAA_14
cobW
ABC_tran
AAA_28
nSTAND3
TctA
DO-GTPase1
KTI12
MMR_HSR1
AAA_7
VirC1
AAA_5
6PF2K
AAA
NACHT
AAA_18
AAA_24
NB-ARC
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAK67060
UniProt:
G2IID7
LinkDB
All DBs
Position
complement(2566321..2567805)
Genome browser
AA seq
494 aa
AA seq
DB search
MFDSLSDRLGSVFDKLRGRGALTEDDVRAAMREVRIALLEADVALPVVRAFVDKATERAV
GSDVLRSVTPGQMVVKIVSDTLTETLGADASDLLIDVTPPAVVMMVGLQGSGKTTTTAKL
AKRLKEKERKKVLMASLDVNRPAAQEQLAVLGTQTDVATLPIVAGQQPVEIARRALQAAK
LQGFDVLMLDTAGRLHVDQALMDEMKAVAQVADPAEILLVVDSLTGQDAVNVARSFTEQV
PLTGVVLTRMDGDARGGAALSMRAVTGQPIKFAGTGEKLDALEPFHPARVAQRILGMGDV
VSLVERAAETIQQEDADKLAKRMAAGKFDLNDLRAQLSQMQRMGGLGMLAGMIPGLKKAQ
AQMANAGVNDKTLIHLDALIGSMTLKEREKPELLNAKRKIRVAKGAGLQVQDVNRLLKMH
KEMETAMKKIKKMGGLKGLAKMFTGGGGGGGLGGLLGGGGGPAGGPAGDLSGLKGLPGMP
DMPRLPPGFQNFKK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacagtctgagcgatcggctgggcagtgtgttcgacaagctccgggggcgcggc
gcgctcaccgaggatgacgtgcgcgccgcgatgcgcgaggtgcgaatcgccctgctcgag
gcggacgtggccctcccggtcgtgcgcgccttcgtcgacaaggcaacggaacgcgccgtc
ggttcggatgtgctgcgctcggtcacgccgggccagatggtcgtcaagatcgtctccgac
acgctcaccgagacccttggcgcggacgcgtccgatctgctgatcgacgtgacgccgccg
gccgtcgtgatgatggtcggtctccagggctcgggcaagacgaccaccacggccaagctg
gccaagcgcctcaaggagaaggagcgcaagaaggtgctgatggcgtcgctcgacgtcaat
cgccccgccgcgcaggaacagcttgccgtgctcggcacgcagaccgatgtggccacgctg
cccatcgtcgcgggccagcagccggtcgagatcgcgcgccgcgcgctgcaggccgcgaag
ctgcagggcttcgacgtgctgatgctcgataccgccggccgccttcatgtcgatcaggca
ctgatggacgagatgaaagcggtggcgcaggtcgccgatccggccgagatccttcttgtc
gtcgacagcctgaccggccaggacgcggtgaacgtggcgcgcagcttcaccgagcaggtg
ccgctgaccggcgtggtgctcacccgcatggatggcgatgcgcgcggcggcgcggcgctt
tccatgcgcgccgtcacgggccagccgatcaagttcgcgggcaccggcgagaaactcgac
gcgcttgagccctttcatcccgcgcgcgtcgcgcagcgcatcctgggcatgggcgatgtc
gtcagcctcgtcgagcgcgcggccgagacgatccagcaggaggatgcggacaagctcgcc
aagcgcatggcggcgggcaagttcgatctcaacgatctgcgcgcccagctctcccagatg
cagaggatgggtggtcttggcatgctcgcgggcatgatccccggtctcaagaaggcgcag
gcgcagatggcgaatgccggcgtcaacgacaagacgctgatccatctcgacgcgctcatc
ggctccatgactctcaaggagcgcgagaagcccgagctgctcaatgccaagcgcaagatc
cgcgtcgccaagggcgcgggcctgcaggtgcaggacgtcaatcgtctcctcaagatgcac
aaggagatggagacggccatgaagaagataaagaagatgggcggtctcaaggggctggcg
aagatgttcaccggcggcggtggcggcggcgggctcggtggcctgctcggcggcggcggt
ggacctgcgggcggcccggccggcgatctgagcgggctcaagggcctgcccggcatgccg
gacatgccccggctgccgcccggcttccagaacttcaagaaatga
DBGET
integrated database retrieval system
