Sphingobium sp. SYK-6: SLG_25320
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Entry
SLG_25320 CDS
T01622
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SLG_25320 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_25320 (recR)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SLG_25320 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SLG_25320 (recR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_C
RecR_HhH
Toprim
RecR_ZnF
DCB
Motif
Other DBs
NCBI-ProteinID:
BAK67207
UniProt:
G2IJ37
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Position
complement(2736098..2736694)
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AA seq
198 aa
AA seq
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MSSPEIDALTQALARLPGLGPRSARRAVLHLLQKRETALAPLLRALESVNERMVQCAICG
NIDTIDPCGICADPRRDGRALCVVEDVADLWALEKSRLFPGRFHVLGGRLSALEGVRPED
LAIAPLVQRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEAYPVRLTQLAHGVPIGGELD
YLDEGTLAQALRARRPID
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacccgagatcgacgcgctcacgcaggcgcttgcccggctccccggtctgggg
ccccgatccgcccggcgcgcggtgctgcatctcctgcagaagcgggagaccgcactggcg
ccgctgctgcgtgcgctcgaatccgtgaacgagcgtatggtccagtgcgccatctgcggc
aatatcgacacgatcgatccctgcggcatctgcgcggacccgcgccgcgacggacgcgcg
ctgtgcgtggtcgaggatgtggccgatctctgggcactggagaagtcgcgcctgttcccc
ggccgcttccatgtgctgggcgggcggctttccgcgctcgaaggggtgcgccccgaggat
ctggcgatcgcgccgctggtgcagcgggtcgcgcagggcggcatcgatgaagtcgtgctc
gcgatgaacgcgacgctcgaggggcagacgacggcgcactacatcgcggagcggctggaa
gcctatccggtgcggctgacccagcttgcccatggcgtgccgatcggcggcgagctcgat
tatctggacgaaggcacgctcgcgcaggccctgcgcgcccgccgcccgatcgactga
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