Sphingobium sp. SYK-6: SLG_26710
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Entry
SLG_26710 CDS
T01622
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLG_26710 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssy03019
]
SLG_26710 (groEL)
03110 Chaperones and folding catalysts [BR:
ssy03110
]
SLG_26710 (groEL)
03029 Mitochondrial biogenesis [BR:
ssy03029
]
SLG_26710 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssy04147
]
SLG_26710 (groEL)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SLG_26710 (groEL)
Messenger RNA biogenesis [BR:
ssy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SLG_26710 (groEL)
Chaperones and folding catalysts [BR:
ssy03110
]
Heat shock proteins
HSP60 / Chaperonin
SLG_26710 (groEL)
Mitochondrial biogenesis [BR:
ssy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SLG_26710 (groEL)
Exosome [BR:
ssy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SLG_26710 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SLG_26710 (groEL)
Exosomal proteins of breast cancer cells
SLG_26710 (groEL)
Exosomal proteins of colorectal cancer cells
SLG_26710 (groEL)
Exosomal proteins of bladder cancer cells
SLG_26710 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
BAK67346
LinkDB
All DBs
Position
complement(2880038..2881660)
Genome browser
AA seq
540 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMLREVANKQNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPMDIKRGV
DLAVGAVVKDLEAHAKKVGANSEIAQVATISANGDAEVGRILAEAMEKVGNEGVITVEEA
KSLETELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQALVPLLEQV
VQSGKPLLVIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGNV
VSEELGTKLENVTINMLGRARKVTIDKDNTTIIDGVGQKSDIDGRVAQIRQQIETTTSDY
DREKLQERLAKLAGGVAVVRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RALKALEGLKVANDDQQSGIDIVRRALRAPVRQIADNAGEDGAWIVGKLLESDDYNWGFN
AATGEYQDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAELPKDEKASPAMPAMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaagtttgcgtcggacgcgcgtgatcgcatgctgcgcggcgtg
gatacgcttgcgaatgcagtgaaggtgacgctgggtcccaagggccgcaacgtcgtgatc
gacaagagtttcggcgcgccccgcatcaccaaggacggggtgacggtcgccaaggaaatc
gaactggccgacaagttcgagaatatgggcgcgcagatgctgcgcgaagtcgccaacaaa
cagaatgacaaggcaggagacggcacgaccaccgcaaccgtgctcgcccaggcgatcgtg
cgcgaaggcgccaaggccgtcgcagcgggcatgaacccgatggatatcaagcgcggcgtc
gacttggccgtgggcgcggttgtaaaggaccttgaggcccacgcgaagaaagtcggcgcg
aacagcgagatcgcccaggtggcgaccatttcggccaatggcgacgccgaggtcgggcgc
atcctcgccgaagcaatggaaaaagtcggcaacgaaggtgtcatcaccgtcgaggaagcc
aagagcctggagaccgaactggaaacggtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcattaccaatgccgaaaagctgaaggtggaactcgacgatccctacatc
ctgatccacgagaagaagctttccaacctgcaggcgctggtgccgctgcttgaacaggtc
gtgcagtccggcaagccgcttctcgtcatcgcggaggatgtggaaggcgaagccctcgcg
acgctggttgtgaacaagctgcgcggcggtctgaagatcgcggccgtgaaagcgcctggc
ttcggtgaccggcgcaaggcgatgcttgaggacatcgcgatcctcacgggcggcaatgtg
gtcagcgaagagcttggcaccaagcttgagaatgtcacgatcaacatgctgggccgggcc
aggaaggtcacgatcgacaaggacaacacgaccattatcgacggtgtgggccagaagtcc
gacattgatggtcgggtcgcacagatccgtcagcagatcgaaacgaccaccagcgactat
gatcgcgagaagctgcaggagcgtctcgcgaaactggctggcggcgtcgccgtcgtccgg
gtcggtggcgcgaccgaggttgaggtcaaggaaaagaaggatcgcgtcgatgacgcgctt
cacgcaacccgcgccgcggtcgaggaaggcattctgccgggcggcggtatcgcgttgctg
cgcgcactgaaggcgctcgaggggctgaaggttgcaaacgacgaccagcagtcgggcatc
gacatcgtccgccgcgcgcttcgcgcgcccgtgcgtcagatcgccgacaatgctggcgag
gacggcgcgtggatcgtcggtaagctgctggagagcgacgactataactggggcttcaat
gccgcgaccggcgagtatcaggatctcgtcaaagccggcgtgatcgatcccgccaaggtc
gtgcgcaccgcgctgcaggatgcagcgtcggttgcttcgctgctcattaccaccgaagcg
ctcgtcgcggaactgccgaaggacgagaaggcatcgcccgccatgccggcgatggacttc
tga
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