Sphingobium sp. SYK-6: SLG_26800
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Entry
SLG_26800 CDS
T01622
Symbol
vsr
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_26800 (vsr)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SLG_26800 (vsr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
BAK67355
UniProt:
G2IJZ7
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All DBs
Position
2886857..2887294
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AA seq
145 aa
AA seq
DB search
MVDRLTPERRSWLMSRVRGKSTMPEMAVRRMAHAMGMRFRLHRRDLPGRPDLVFPRYRTV
LFVHGCFWHRHAGCRKATSPKSRTEYWQAKFEGNVARDERNETQLIRMGWRVLTIWECDT
KDSELLREKLESVRSIRGGKDDGLD
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggttgaccgcctgacgcccgagcgacgctcgtggctgatgtcgcgagtccgagggaag
agcacgatgccggagatggcggtgcgccgcatggcgcacgccatgggcatgagatttcga
ctgcacaggcgcgatctgcccgggcgccccgacctcgttttccctcggtatcgtaccgtc
ctgttcgtccacggatgcttctggcatcgtcacgccggatgccggaaggcgacgtcgccg
aagtcgcgtacggaatattggcaggcgaagttcgagggcaacgtcgcccgcgacgagaga
aatgagacccaactgatccggatgggctggcgagtgttgacgatctgggaatgcgatacg
aaagattcagagcttttgagagagaagctcgaatcggtgcggtctatcagaggggggaag
gatgacggactcgactga
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