Sphingobium sp. SYK-6: SLG_26880
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Entry
SLG_26880 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_26880
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_26880
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
BAK67363
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Position
2894454..2897054
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AA seq
866 aa
AA seq
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MTISKGAFTAGCLVAAAIQAGMPASAKAQTESVATWDLPAQALGETLRAIARRSGRDILF
AEALVRGRRARAVRGRLTARAAVRAALAGSDLVVEERDGALLVRARPHAARQDDPGPGEI
VVTGTRIRGAQSPSPEIVATRQALEDAGIDDMAGFSRILPQNFSGGQNPGVAGGGDQGGQ
SNINNSTTLNLRGLGADATLTLINGHRIAYDALNQGVDVSAIPLAAIDRIEVIADGASAL
YGSDAVGGVVNLRLRRDYSGLETTARFGASTEGGNVQQQYSAVTGARWASGGFMVAADYD
HSTPVLASDRSYTRKLNGSQTLLARQSQTSVVLAGHQQLTPGVTFELDGQFSDRRLQKTN
AFTATTDPFVNGLVNHPAARSWSVTPTLRVDLSPDWTASLEATRSVSKTDIRSRNFRSGI
ETPGRLIYENRLINIEAGAEGPLVRMPGGDARLAVGGGWRQFDLGIDVTQTSAGVTRTTR
SGNETRRSLFAYGELSVPLVGPDNRMPLVEQLQLSAAVRYERYQGIEQVATPKLGIIYAP
HRDVTLRFSWGRSYKIPTLDQVNRVEAGGLLPGSLFAPQPVPALPSGATVLVLSGGNPDL
RSERATTWTASFEVRPQFLEGLKLGASWFDVDYRDRIASPISDTLSALANPAFADFVLMA
PSAAAVQAIVDGLPQAITNATGQPFDPARVGAILDGRLRNSAHEHARGVDLDIEYRISPG
PRDRLTLSATASYLDASRQLSPGQPVLARSGVIFTPPTWRVRTGGSWDRGNTGFTAFFNY
SGGVYDNRLASPGDIPAFPTVDLSARIRTTDDRGLLHGLEFRLSALNVLDEKPHTIFTSD
PAAIPYDSTNQSSIGRFISLAVTKSW
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcagcaagggggcgttcacggccggctgcctcgtggcggcggcaatccaggca
ggcatgccagcatcggcgaaggcgcagacggagagcgtcgcgacctgggatcttcccgcg
caggcgctgggagagacattgcgggcgatcgcgcgccggtcggggcgcgacatcctgttc
gcggaggcgcttgtccgggggcgccgggcacgagcggtacgcggccgccttacggccagg
gccgcagtgcgcgcagccctggccggcagcgaccttgtcgtcgaagagcgcgacggcgca
ttgctggtacgggcccggccgcatgccgcccgacaggacgatccggggccgggcgagatc
gtggtgaccggcacgcgcatccgtggcgcgcaaagcccgtcgccggagatcgttgcgaca
cggcaggcgctcgaggatgcgggcatcgacgatatggccggcttctcgcgtatcctgccc
cagaatttctcaggcgggcagaatcccggcgtggcgggcggcggcgaccagggcggccag
agcaatatcaacaattcgacgacgctcaacctgcgggggcttggtgccgacgcgacgctg
acgctgatcaatggccatcgcatcgcctatgacgcgctgaaccagggcgtcgacgtatcg
gctattccgctcgccgcgatcgaccggatcgaggtgatcgcggacggtgcctcggcgctc
tacggctcggatgcggtcggcggcgtggtcaatctgcggctgcgacgcgactatagcggt
ctggagacgaccgcccggttcggtgcctcgaccgaaggcggcaatgtccagcagcaatat
agcgctgtgaccggcgcgcgctgggcgtcgggcgggttcatggtcgcggcggactatgat
cattcgacaccggtcctggcctcggaccgaagttatacgcgcaagctcaacggatcgcag
acattgctcgcgcgacagtcgcagaccagcgtcgtgctggccggccatcagcaactcacg
ccaggtgtcaccttcgagctcgacgggcagttctccgaccgcaggcttcagaagacaaat
gccttcacggccacgaccgacccgttcgtgaacggtctcgtcaaccatcctgccgctcgc
tcatggtcggtcacgccgacattgcgcgtcgatctgtccccggactggaccgcctcgctg
gaggcgacccgctcggtcagcaaaacggatatccgctcgcgcaatttccggagtggcatc
gagaccccggggcggctgatctacgaaaacaggcttatcaatatcgaggccggcgccgaa
ggcccgctggtccggatgcccggcggcgacgcccgtctcgccgtcggcggcggctggcgc
cagtttgatctcgggatcgacgtcacgcagacgagtgcgggcgttacccggacgacgcga
agcgggaacgaaacgcgcaggagcctcttcgcctatggcgagctttcggtgccgctggtg
gggccggacaaccgcatgccgcttgtcgagcagctgcagctcagtgcggccgtgcgatat
gaacgctaccagggcatcgaacaggtggcgacgcccaagctcggcatcatctatgcgccg
catcgcgatgtgacgctgcggttcagctggggcaggtcctacaagattccgacgctcgat
caggtcaaccgcgtcgaagccggcgggcttctgcccggcagcctgttcgcgccccagccg
gtgccggcgctgccgtccggtgcgacggttttggtgctgagcgggggcaatcccgacctc
cgctccgagcgagcgacgacctggaccgcgtcgttcgaggtgcgtccgcaattcctcgag
ggcctcaaactgggcgcgagctggtttgacgtcgattatcgcgaccgcatcgcctcgccg
atctcggatacgctgtcggcgctcgccaatccggcattcgccgatttcgtcctcatggcc
ccttcagcggcagcggtgcaggccatcgtcgatggtctgccgcaggcaatcaccaatgcg
accggacagccgttcgatccggcaagggtcggcgcgatcctcgatggacgtctgcgcaat
tcagcgcatgagcatgcccgcggcgtggatctcgacatcgaataccggatcagtccgggt
ccccgcgacaggctgacgctcagcgcgactgcaagctatctcgatgccagccggcagctc
agccccggccagcccgtgcttgcgcgatcgggggtgatcttcacgcctcccacgtggcgc
gtgcggacaggcggtagctgggatcgcggcaacaccgggttcacggccttcttcaactat
tccggtggggtctatgacaatcgcctcgcgtcgccgggcgatatcccggccttcccgaca
gtggatctcagcgcgcgcatccgtaccacggacgaccggggcctgctccatggcctggaa
ttccggctgtcggcgctcaacgtcctcgacgagaagccgcacaccatcttcacctccgac
ccggcggcgatcccctatgattcgacgaaccagtcgtcgatcggacggttcatcagcctg
gccgtgaccaaatcatggtga
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