Sphingobium sp. SYK-6: SLG_27640
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Entry
SLG_27640 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_27640
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_27640
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAK67439
LinkDB
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Position
complement(2981303..2983837)
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AA seq
844 aa
AA seq
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MNSRILLIGGTAMALLATSSANGQTAQTGSEASETDIVVTAQFRAQNLQDTPIAITAVNA
GMLEARSQTDISQVANQAPSVTLKPQGAAYGPSLSANIRGVGQTDFNPALEPGVGFYVDD
VYYATLTGSIIDLLDLDRVEVLRGPQGTLAGRNSIGGAVKLYSKKPEGSNTGYVAATYGI
RNRLDLRGSADFHVASGIDARISGVAKKQEGYVDRLDFGCLYPAGGTATFTPAFPTASNP
NQTPMLMNPVGGIPARTNRGDCVLAKEGEVGYIAMRGQLRVRPTDTLDINIIGDYTDDDR
VAAGSVLLLRQYPNGAVASPRFPLPLIPATGSSPPQNYAAASPPGRDINPFAAPDTLLAY
DNRFVCGQYCNFGTYDMPADGNFRASSGDGRVRFKGWGVSGQIEWALADHLQLNSITAFR
RYTSNFSNDNDVSPMAHSLGYGPLTFRFFSQELRLNGQIGSTIDYTVGAYYSDQKSVYTS
FQDLRSSNLQFQQSDPVDADSKAVFAHLSWNPIDPLTLTGGIRYTKESKTYQYIRQRPYL
DPTSVTANGVLPLNGTIGKFSGERVDYRANVQYAFSNDVMAYAQFSTGFKGGGVNPRPFF
VQQALSFGPETLNAYELGLKTDFFDRRLRLNVATFLSKYKGIQLSLSNCTAITGAGFGAP
CALPVNAGDADIKGVEVEATIRPVDGLLIDGAVSYLDFEYTRFGTYTVGTTTVAVGGPTN
LNGPQFGDYAPYTPKWKWSAGAQYEIDLGTAGSLTPRIDASFQSKIYTVSANRSSNRIDA
YTVANARLTWRNDEEDLDVSLEVTNLFDEYYLLTIYDQTVGGQGYSSGQPGRPREWAVTV
RKKF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcagaatactcttgatcggcggcacggccatggccttgctcgcgacatcttcg
gcaaacgggcaaaccgcacagacagggagcgaagcttccgagaccgatatcgtcgtaaca
gcgcagttccgggctcaaaatctccaggacacgccgatcgcgattacggccgtcaatgcg
gggatgctggaagcgcgtagccagaccgatatcagtcaggttgccaatcaggctccttca
gtcacgctcaaaccgcagggagccgcttatggcccgtccctgagtgccaatattcgcggc
gttggccagactgacttcaacccggcgctcgaacccggcgtgggcttctatgtcgatgat
gtctattatgcgacattgaccggttcaatcatagatctgctcgaccttgatcgcgtcgag
gtgctgcgtggtccgcaagggacgctggccggccgaaactccatcggtggcgcggtcaaa
ctttattccaagaaacccgaaggcagcaacaccggctatgtggccgcgacatatggcatc
cgcaatcggctcgacctgcgtggaagcgcggatttccatgtcgcaagcgggatcgatgcg
cgcatctcgggcgtcgcgaagaagcaggaaggctatgtggatcggctcgatttcggttgc
ctctatccggcgggcggcacggcgaccttcaccccggcctttccaacggcttccaatccc
aaccagacgccaatgctgatgaaccccgttggcggaatcccggcgcggaccaatcgcggc
gactgtgttctcgcgaaggagggagaggttggctatatcgccatgcgcggccagcttcgc
gtgcgaccgacagatacgctcgatatcaacatcatcggtgattataccgatgatgatcgc
gtcgcggcagggtcggtgctgctgctgcgccaatatccgaacggcgcggtggcgagtccc
cgtttccccttgccgctcattccggcgacaggatcatcgccgccgcaaaactacgctgcc
gcttcgcccccgggccgcgacataaacccgtttgcagccccggatacgctgctggcctat
gacaatcgctttgtttgcggccaatattgcaacttcggcacctacgacatgcctgccgac
ggaaatttccgggcgtcgagcggcgatggccgggtgagattcaagggctggggcgtctcg
ggccagatcgaatgggcgctcgccgaccatttgcagctcaattccatcacggcattccgg
cgctacacgtcaaatttctcgaacgataatgacgtctcgccgatggctcacagccttggt
tatgggccgctgacctttcgcttcttcagtcaggagctcaggctgaacggccagataggg
agcacgatcgactacacggttggcgcctattacagcgaccagaagtccgtctatacctcg
ttccaggatctgcgttcttcaaatctccagtttcagcaaagtgacccggtcgacgcagac
agcaaggcggtgtttgcccatctgtcctggaacccgatcgacccgctgactttgacgggc
ggcatccggtacaccaaggagagcaagacctaccaatatatccgccaacggccctatctt
gacccgacctcggtaacggcaaacggcgttctgccgcttaatggaacgatcgggaagttc
agcggggagcgcgtggattatcgcgcaaatgtgcaatatgccttttccaacgacgtcatg
gcctacgctcagttctcgacgggcttcaagggcggcggcgtaaatccccggccattcttt
gttcagcaggcgctttcattcggcccggaaacgctgaacgcgtatgaactgggcttgaag
accgacttcttcgatcggcggctgcgcctgaacgtcgcaacattcctgagtaagtacaaa
gggatccagctttcgctcagcaattgcacggctatcaccggcgcagggtttggcgcgcca
tgcgctctgccggtcaacgcgggtgatgcggatatcaagggcgtcgaagtggaggcgacc
atccgtccggtggatggtctgctcatcgatggcgcggtcagctatcttgatttcgagtat
acgcgctttggaacctacaccgtcggcacaaccacggtggcggtgggcggcccgaccaat
ctgaacggcccgcaattcggcgactatgcgccctacacgccgaaatggaagtggagcgcc
ggcgcgcaatatgagatcgacctcggtacggcgggctcgctgaccccgcgcatcgatgcc
tcgttccagagcaagatctatacggtgtccgcaaaccgttcgagcaatcgcatcgacgcc
tacacggtcgcaaatgcgcggctcacctggcgcaacgatgaggaagatcttgatgtctcg
ctcgaagtgacaaatctcttcgacgaatactatctgctcacgatctacgatcagacggtc
ggcgggcagggctattccagtggccagcccgggcgtccccgggaatgggcagtcactgtt
cgaaagaagttctga
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