Sphingobium sp. SYK-6: SLG_27720
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Entry
SLG_27720 CDS
T01622
Symbol
nirB
Name
(GenBank) nitrite reductase (NAD(P)H) large subunit
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00910
Nitrogen metabolism
ssy01100
Metabolic pathways
ssy01120
Microbial metabolism in diverse environments
ssy01310
Nitrogen cycle
Module
ssy_M00531
Assimilatory nitrate reduction, nitrate => ammonia
ssy_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SLG_27720 (nirB)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
SLG_27720 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
DAO
Pyr_redox_3
NAD_binding_8
GIDA
FAD_binding_2
AlaDh_PNT_C
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
BAK67447
UniProt:
G2IKP5
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Position
complement(2992862..2995381)
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AA seq
839 aa
AA seq
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MDFQDYQPREGADEPADRFSGDPREHLVVVGNGMAGCRAIEELLARDAGRYRITIFGAEQ
HVNYNRIMLSPVLAGEKTFDEIIINGHDWYRDNGITLITDDPVVSIDRASATVTSRSGCT
LGYDRLLIATGSDPFIIPVPGKDLPGVVSFRDMKDVGTMLAAAEKGGAAVVIGGGLLGLE
AAHGLALRGMNVTVLHLPGSLMERQLDEAAGWLLKTALEERGQTILTGADTAEIYGDGKV
EGVRLKDGREIPASLVVMAVGIRPSVALAREAGLEVGRGIKVDDHMVTNDPSILAVGECA
EHDGNVYGLVAPLWDMCRSFADGLTGKANPYRRSATSTKLKVAGLDVFSAGDFSGVGGGC
EDIVLRDASRGIYKRLVLQDDRIIGAVLYGDTADGSWYFDLLRKGECVADLRDVLIFGQA
FASGGGAADPKAAVAALSDDAEICGCNGVSKGQVLSSIARGAHSLDAVRATCKASASCGS
CTGLVETLLAITLGDDVQAGSRTMCKCTTFTHDDVRREIVAQDMRSIPEAMQKLHWFTPD
GCSSCRPALNYYLLCALPGAYVDDQQSRFVNERMHANIQKDGTYSVVPRMWGGLTNPREL
RAIADVVEKYDAPMVKVTGGQRLDIFGIRKEDLPAVWADLNAAGMVSGHAYGKSLRTVKT
CVGSEWCRFGTQDSTGLGVRIERMTWGSWMPHKFKIAVSGCPRNCAEATIKDFGVVCLDS
GYELSVGGNGGIKVRATDLLCRVATEQEALDYCAAFIQLYREEARYLERTAPWIERVGID
YVKQRIVEDDIGREALRARFLFSQSFSQDDPWAQRAEGVEREQHAHMAQFRPARLEEMA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaggactatcaaccccgcgaaggggccgacgagcctgcagatcggttctcc
ggtgatccacgcgagcatctcgtcgtggtgggaaacggcatggccggctgccgggcgatc
gaggaactgctggcgcgagacgcggggcgctatcgcatcaccatcttcggtgccgagcag
catgtgaactacaaccggatcatgctttccccggtcctcgcgggcgagaagacgttcgac
gagatcatcatcaacgggcatgactggtatcgcgacaacgggatcacgctcatcacggac
gatcccgtcgtctccatcgatcgcgcgtccgcaacggtcaccagccggtccggctgcacg
ctgggctatgatcgcctgctgatcgcgacggggtcggacccgttcatcatccccgtgccg
ggcaaggaccttcccggcgtcgtcagctttcgcgacatgaaggatgtcggcaccatgctc
gccgcagcagaaaagggcggtgcggccgtggtgattggtggcggcctgctcggtctcgag
gcggcgcatggccttgcgctgcgcggcatgaacgtgacggtgctgcatctgcccggtagc
ctgatggagcgtcagctcgacgaggctgcgggctggctgctcaagacggcccttgaagaa
cgtggacagacgatcctcacgggcgccgacacagccgagatttatggtgacggcaaggtg
gaaggcgtgcgcctcaaggacgggcgggaaatcccggccagtctcgtcgtcatggccgtc
ggcattcgtccttcggtcgccttggcgcgcgaggcggggctggaggtcgggcgcggtatc
aaggtcgacgaccatatggtcacgaacgacccgtcgatcctggccgtgggagagtgcgcc
gaacatgacggcaatgtctatggcctcgtggcgccgctgtgggacatgtgccgcagcttc
gcggacggcctgaccggcaaggcgaacccctatcgccgttccgcaacctcgaccaagctc
aaggtcgccgggctggatgtcttctcggcgggcgacttttcgggcgtcggcggtggttgc
gaggatatcgtcctgcgtgatgccagtcggggcatctataagcgtctcgtgctgcaggac
gaccgcatcatcggcgcggtcctgtatggcgataccgctgacggaagctggtatttcgat
cttctgaggaaaggcgaatgcgtcgccgacctgcgtgacgttctgatcttcggccaggca
ttcgcctcgggagggggcgcggcggaccctaaggctgccgttgcagcgctctcggacgat
gccgagatttgcggctgcaacggcgtctccaaggggcaggtcctttcctccatcgcgagg
ggggcgcacagtctcgacgccgtgcgcgccacctgcaaggcgtccgccagttgcgggtcc
tgcaccggcctggttgaaacattgctggcgatcacgctgggcgacgatgttcaggccggc
tccaggaccatgtgcaaatgcacgaccttcacgcatgacgatgtccgtcgcgagatcgtg
gcccaggacatgcgatcaatccccgaggcaatgcagaagctccattggttcacgcctgat
ggttgctcgtcctgccgtccggcgctcaattattatctgctgtgcgcattgcccggtgcg
tatgtcgacgatcagcagagccgcttcgtcaacgagcggatgcacgccaacatccagaag
gacggcacctattccgtcgtgccgcgcatgtggggcggcctcaccaatccgcgcgagctg
cgcgccatcgccgatgtggtcgagaaatatgacgccccgatggtcaaggtgacgggcggg
cagcggctggacatattcggcatccgcaaggaggatctgcccgcggtttgggctgacctc
aatgccgccggcatggtttcgggccatgcctatggcaagtcgctgcgcacggtgaagacc
tgcgtcggcagcgagtggtgccgcttcggcacgcaggattcgaccggcctcggcgtcagg
atcgagcggatgacatgggggtcctggatgccccacaagttcaagatcgccgtctcgggc
tgcccgcgcaactgcgcggaagcgaccatcaaggactttggcgtggtctgcctggattcg
ggctacgagctcagcgtcggcggcaatggcggcatcaaggttcgcgcaaccgatctgctt
tgcagggtggcgacggaacaggaagcgctcgattattgcgctgccttcatccagctctac
cgcgaggaagcccggtatctggagcggaccgcgccttggatcgaacgggtcggcattgat
tatgtgaagcagcggatcgtcgaggatgacatcggtcgcgaggcgctgcgcgcgcgcttc
ctcttctcgcagagcttcagtcaggacgatccctgggcgcagcgcgccgaaggcgtggag
cgcgagcagcatgcgcacatggcgcagttcagacctgcacggctggaggaaatggcatga
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