Sphingobium sp. SYK-6: SLG_28820
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Entry
SLG_28820 CDS
T01622
Name
(GenBank) putative anti-sigma factor
KO
K07165
transmembrane sensor
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SLG_28820
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
DUF4880
FecR_C
Motif
Other DBs
NCBI-ProteinID:
BAK67557
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Position
3118804..3119787
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AA seq
327 aa
AA seq
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MEQPDDAASWLARARSGKMTESESLDLASWLSDDRNRREYEALNARLQGLEALRSHPDIL
AMREEARRPAWFRQPLAMAAACVTILGLSASVLFLWNALPGSSRDAGVVTALYETPDGKT
STVMLPDGSQMLLDAATTVRASMQEDSRRIELLKGRANFVVAPDRQRPFAVKAGDRTVVA
LGTQFEVNLAEHSVEIVLMEGRVAVRDADRSRPHARDLVMKPGYRLVAGDGNWTLSPVDL
RSLSRWKDGLLIFDEARVGDIVVEMNRYLPEKIVISSPAVADRRMSAVLRAGDVNTFLSA
IDAIGIATWSHAADRTYRLSEADHKKI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccggacgatgccgccagctggctggcccgcgcccgctccggaaagatgacg
gagagcgagagcctggatctggccagctggctgtccgatgatcgcaacaggcgggaatat
gaggcgctgaacgcgcgactgcaggggctggaagccctgcggtcccatccggacatcctc
gcgatgcgagaggaagcgcgccggccggcatggttccggcagccgctcgccatggccgcg
gcctgtgtcacgatccttggcttgtcggcgagcgtcctgttcctgtggaatgcgcttccg
ggcagcagccgggatgcgggcgtcgtgacggccctctacgaaacgccggacggaaaaacc
tcgaccgtcatgttgccggacgggagccagatgttgctggacgccgccacgacggtgcgg
gcatccatgcaggaagacagccgccggatcgagctgttgaagggaagagcgaatttcgtc
gtcgcgccggaccggcaacgtcctttcgccgtgaaggcaggcgacaggacggtcgtcgct
cttggcactcagttcgaagtcaatctggccgaacacagcgtggaaatcgtgctgatggag
ggacgcgtcgcggtgcgcgatgcggacaggagccgcccgcatgcccgtgatctcgtgatg
aagccgggctatcggctggtcgcgggtgacggcaactggacgctttcgcccgtcgatctg
cgcagcctgtcgcgctggaaggacggcctgctgattttcgacgaagcccgtgtcggcgac
atcgtggtggaaatgaaccgctatctgccggagaagatcgtcatctcgtcgccagccgtc
gctgaccggcggatgagcgccgttctcagggcaggcgacgtcaacacgttcctgtccgcc
atagacgcgatcggcatcgccacatggagccatgccgccgaccggacctatcgcttgagc
gaagccgaccacaaaaaaatttga
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