Sphingobium sp. SYK-6: SLG_29430
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Entry
SLG_29430 CDS
T01622
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssy03016
]
SLG_29430 (miaB)
Enzymes [BR:
ssy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SLG_29430 (miaB)
Transfer RNA biogenesis [BR:
ssy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SLG_29430 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAK67618
UniProt:
G2ILM5
LinkDB
All DBs
Position
3191148..3192491
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AA seq
447 aa
AA seq
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MTDPKPQPRTFHVKSFGCQMNVYDGERMAELLADRGMTAAAEGLDADLVVLNTCHIRERA
AEKVYSDIGRLRREDGSRPMIAVAGCVAQAEGPEITRRTKAVDIVVGPQAYHNLPGLIDD
VIAGRDAVDTDMPAASKFDVLPGRTRRSSPTSFLAVQEGCDKFCTYCVVPYTRGAEVSRS
WSAILDEARALVDGGAREITLLGQNVNAWEGEDEAGRRQGLDGLIRALDRLPDLARIRYT
TSHPNDMADGLIAAHGDVEKLMPFLHLPVQAGSDRILKAMNRSHSRDSYLRLIERIRAAR
PDIALSGDFIVGFPGETEADFEETLSIVRETAYAHAFSFKYSSRPGTPAADMDGQIAPDL
MDERLQRLQAAISADQLAFNQATVGKRTTILLERKGRHPGQLIGKSPWLQSVHVEAADAR
IGDIIEVDIVSAGPNSLGGAVVARRAA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccaagccccagccccggacattccacgtcaagtcattcggttgccagatg
aatgtctatgacggcgagcgcatggccgaactgctggccgaccgcggcatgacggcggcc
gccgagggcctcgatgccgatctcgtcgtgctcaatacctgccacattcgcgaaagggcc
gcggaaaaggtctattcggacatcggccgcctcaggcgggaagacggatcgcgtccgatg
atcgccgtcgccggctgcgtcgcgcaggccgaggggccggaaatcacccggcgcaccaaa
gcggtcgatatcgtcgtcggtccgcaggcctatcataatctgccgggtctgatcgacgac
gtgatcgcgggacgagacgcggtcgacacggacatgccggccgcctccaaattcgatgtg
ctccccggccgcacgcggcgcagcagcccgaccagcttcctcgccgtgcaggaaggctgc
gacaagttctgcacctattgcgtggtgccctatacgcgcggggcggaagtcagccgctcc
tggagcgccattctggacgaagcgcgcgcgctggtcgatggcggcgcccgcgagatcact
ctgcttggccagaatgtgaatgcctgggaaggcgaggacgaagccgggcggcggcagggg
ctcgacggcctcatccgcgcgctcgaccgactgccggaccttgcgcgtatccgctacacc
accagccaccccaacgacatggccgacggcctcatcgccgcgcatggcgatgtggagaag
ctcatgccttttctccacctgccggtgcaggcggggagcgatcgcatcctcaaggcgatg
aaccgcagccacagccgcgactcctatctgcgcctcatcgagcgcatccgcgccgcgcgg
ccggacatcgccctgtcaggggatttcatcgtcggcttccccggcgaaaccgaggccgac
ttcgaggagacgctctccatcgtgcgcgagacggcctatgcgcatgccttcagcttcaaa
tattcctcgcgccccggcacgccggccgccgacatggacggccagatcgcgccggacctg
atggatgagcggctccagcgcctgcaggccgcgatcagcgccgaccagctggccttcaat
caggcgactgtgggcaagcgcacgaccatcctgctggagcgcaagggccgccaccccggc
cagctcatcggcaagtcgccctggctccagtccgtgcatgtggaagcggccgacgcccgc
atcggcgacatcatcgaggtggatatcgtcagcgcaggaccgaacagtctcggcggcgcg
gtcgtggcgcggcgcgccgcctga
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