Sphingobium sp. SYK-6: SLG_29860
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Entry
SLG_29860 CDS
T01622
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00541
Biosynthesis of various nucleotide sugars
ssy01100
Metabolic pathways
ssy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SLG_29860 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssy01005
]
SLG_29860 (kdsB)
Enzymes [BR:
ssy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SLG_29860 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ssy01005
]
Lipid A
SLG_29860 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BAK67661
UniProt:
G2ILR8
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Position
3227425..3228264
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AA seq
279 aa
AA seq
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MTTAGSLDPEALARAKTVIVIPARYPSSRFPGKPLAVLRQGSVAAKPLIRWSHDAASAVT
NAQAVLVATDDERIAETVRGFGGLALMTPESCANGTERVAACLEQLPGAELLVNFQGDAL
LTPPPFVEALIAHMERHPEAQAGTVAVRCSAETFRHLAEDAAQGRVGGTTVVVNDRGEAL
YFSKRILPYLPAGRMPDDDMPVLLHLGLYAYRRAALERYVGRGATMLETVEGLEQLRFLV
AGMPMTVLTLDEPGFPMVEINNPSDIAIVEGILASRDRP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccggttcgctcgatcctgaggccctcgcccgtgcgaagaccgtcatcgtc
attccggcgcgctacccatcgagccgctttccgggcaagccgctggccgtgctgcggcag
ggttccgtcgccgccaagcctctgatccgctggagccatgacgccgcatccgcggtgacc
aatgcgcaagccgtgctggtcgccacggatgacgagcgcattgccgagaccgttcgcggg
ttcggtggtctcgcgctcatgacgccggaaagctgcgccaacggaacggagcgtgtcgcg
gcctgcctcgaacagctccccggcgccgagctgctggtcaatttccagggcgatgccctg
ttgacgcccccgcccttcgtcgaggcgctgatcgcgcatatggaacgccatcccgaggcg
caggcgggcaccgtcgcggtgcgctgctcggcggaaaccttccgccatctcgccgaagat
gccgcgcagggccgcgtcggtggcacgaccgtggtggtgaacgatcgcggcgaggccctt
tatttctcgaagcgcattcttccctacctgccggcgggtcgcatgccggacgacgacatg
cctgtgcttctgcatctcggcctttacgcctaccggcgcgccgcgctggagcgctatgtc
ggcaggggcgcaaccatgctcgaaacggtcgagggtctcgagcagctgcggttcctcgtg
gcgggcatgccgatgactgtgctgacgctggatgaaccgggctttccgatggtcgagatc
aacaaccccagtgacatcgccatcgtcgaggggatcttggcgagccgcgacaggccctag
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