Sphingobium sp. SYK-6: SLG_30040
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Entry
SLG_30040 CDS
T01622
Name
(GenBank) putative anti-sigma factor
KO
K07165
transmembrane sensor
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SLG_30040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
DUF4880
FecR_C
Motif
Other DBs
NCBI-ProteinID:
BAK67679
UniProt:
G2ILT6
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All DBs
Position
complement(3250072..3251061)
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AA seq
329 aa
AA seq
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MIKSESSQSIDEAAADWVARRDRADLTQEEEAAFQHWLMGDVRRPGALLRAQAVFLRSEA
AGALGNRYDPADFQIEAKADISAPQVSRRRLLMAGSGMAAAVIVGGLGFGLLMPQAYATE
RGERRLVRLEDGSSIFLNTDTRVSVRYAGGARIVDLVKGEAFFTVAPDAKRPFTVEAGED
RISTGGASFCVRLLEDRPARILVDEGQVSATAAAGHNVLLRAGTRLDMALDSPGRARPVS
ISAEEIIRDLAWRDGKIAFQGETLAQAAEAFARYGDPSIEIRDEALRQEQVTGLFAANDP
VGFSKAIASLFGAHLVRQGSSIVLSRPAA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtccgagtccagtcagagcattgatgaggcggcggctgactgggtggcgcgc
cgtgatcgggcggatctgacgcaagaggaagaggcggcttttcagcattggttgatggga
gacgtgcgccggcccggcgcgctcctgagagcgcaggcggtgttcctgcgcagcgaggcc
gccggcgctctgggcaatcgttatgatccggcagacttccagatcgaggccaaggcggat
atctccgcccctcaagtctcgcggcggcgtctgctgatggcgggcagcggcatggcggcc
gctgtgattgtcggcgggctcggtttcggcctgctcatgccgcaagcttatgcaacggag
cgcggagaacggcggctcgtgcgcctcgaagacgggtcgagcatcttcctcaacaccgat
acgcgcgtttccgtgcgctatgccggcggcgcgcggattgtcgatctggtcaagggagaa
gccttcttcaccgtcgcgcccgatgcgaaacgtcccttcacggtcgaggccggtgaggat
cgcatcagcaccgggggcgccagtttttgcgtgcgcctgctggaagatcggccggcccgc
attctcgtcgacgaggggcaggtgagcgcgaccgctgctgccggccacaatgtcctgctg
cgggcgggaacccgtctggatatggcgttggactccccgggccgggcacgccccgtctcg
atctcggcagaggagatcattcgcgatcttgcctggcgcgacggcaagatcgcctttcag
ggcgagacgctcgcacaggcagcggaggccttcgcacgctatggtgatccatcgatcgaa
attcgcgacgaggctttgcggcaggagcaggtcacgggcttgttcgcggccaacgatccg
gtcgggttcagcaaggccattgcaagcctgttcggcgcccatctggtccgccagggcagc
agcatcgttttgagccgtccggccgcctga
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