KEGG   Sphingobium sp. SYK-6: SLG_30380
Entry
SLG_30380         CDS       T01622                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLG_30380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssy02044]
    SLG_30380
Enzymes [BR:ssy01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SLG_30380
Secretion system [BR:ssy02044]
 Type IV secretion system
  Trb secretion system protein
   SLG_30380
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE TrwB_AAD_bind AAA_16 AAA_19 ABC_tran nSTAND3 AAA_29 DEAD cobW AAA_22 DUF815 ResIII P-loop_TraG DUF87 MMR_HSR1 Septin ATPase AAA_7 RsgA_GTPase CbiA Mur_ligase_C PduV-EutP ABC_ATPase TsaE AAA_10 Sigma54_activat NACHT MobB AAA_28 AAA_30 GTP_EFTU SLFN-g3_helicase PCMT AAA_23 IstB_IS21 ATP_bind_1 AAA_11 SRP54 Pox_A32 SRPRB Viral_helicase1 UvrD-helicase
Other DBs
NCBI-ProteinID: BAK67713
UniProt: G2ILX0
LinkDB
Position
complement(3283643..3284629)
AA seq 328 aa
MTIQPIRSEAKSRGARMLRTALGSSIAAWLDDPAVIEVMLNPDGRLWVDRLGDGISDTGM
TLSVADGERIVRLVAHHVGVEVHARSPRVSAELPEGGERFEGLLPPVVAAPAFAIRKPAV
AVFTLDDYAAAGIMSAAHAEALRHGVETRANILVAGGTGSGKTTLVNALLAEVAKTADRI
VLIEDTRELQCAAPNLVAMRTKDGVVTLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGVGTIHAGTALGALRRMEQLIQEAVVTVPRALLAETIDLIAVLVRDGHGRHLAE
LARVEGIDAATGDYRLTPLAPPNLGDAP
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgaccatccagccaatccgatccgaggcgaaatcacgcggcgcgcggatgcttcgcacg
gcgctgggatcgtcgatcgcggcctggctcgacgacccggccgtgatcgaggtgatgctg
aacccagacggacggctgtgggtcgatcggctcggcgacgggatttccgataccggcatg
acgctgagcgtagcggacggcgaacggatcgtccgtctggtcgcccaccatgtcggcgtc
gaggttcatgcccggtccccgcgtgtttcggccgaactgccagagggcggcgaacggttc
gaggggctgcttccgcccgtcgtcgctgcaccggcctttgcgatccgcaagcccgcggtc
gccgtgttcacgctcgacgactatgcggcggccgggatcatgtcggcggcacacgccgag
gcgctgcggcacggcgtcgagacccgcgccaacatcctcgtcgcgggcggcaccggcagc
ggcaagaccacgctggtcaacgcgctgctcgccgaggtcgccaagaccgccgaccgcatc
gtgctgatcgaagacacgcgcgagcttcagtgcgccgcgccgaacctcgtcgccatgcgg
accaaggatggcgtcgtcacgctgtccgatctcgtgcggtccagcctgcgcctgcgcccc
gaccgcatccccatcggcgaggtgcgcggtgcggaggccctcgacctcctcaaagcctgg
gggaccggacaccccggcggcgtcggcaccatccacgccgggaccgcgctcggcgcgcta
cgccgcatggagcagctcattcaggaagccgtcgtcacggtcccgcgcgcgctgctcgcg
gagaccatcgacctgatcgccgtgctggtccgcgacggccacggccgccacctcgccgag
ctggcccgcgtcgaggggatcgacgccgcgaccggcgattaccgcctgacccccctcgca
ccccccaacctcggagacgcaccatga

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