Sphingobium sp. SYK-6: SLG_30910
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Entry
SLG_30910 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_30910
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_30910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAK67766
LinkDB
All DBs
Position
complement(3336797..3339334)
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AA seq
845 aa
AA seq
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MNFRILALAGASLSTLVAAQARAEAEPADADTIIVTAQLREQDPIAVPMALTAIGADELD
RFGLQELDKLSRFVPGFVVQNQSPNNPGFVMRGITSDSGAATNEPRVSVFQDGVSISKSR
GSYVELFDIERVEVAKGPQSTLYGRGALTGAVNIIQNKAKLGRIEGSAALSYGNYESFIG
EAMVNAPIGDNVAVRIAGRVRQRDGYVENLLGGEDFNSADTKAIRGALHAEAGKLTFDLI
GNYQKDRPAGTSFKSIAYNPTDPATGAVIGDRGRNSGAALVAGAGGFEGGKPLGLDREVW
GVTGLANLELDDRFTLTSITAYRRFESLEIFDADGVSLPILTAAEGAEGKQFSQELRLAF
AQGPLTAFVGASYFHEDGAQRGPAQFDERMVLARLAGALNGGGAIPGRAATDPAPAALFA
NPAFTGMLLQGVAGAYGVALSSAQAQAIAANLKSAHLETSTNTARTNAFDLFGDVTMRVS
ERFELGAGLRYTHDDKRSGYTASVLNGRSIVGGFIGALSQPAATRTALLQALAVPGAATI
PPSAAYPVPLFGLGAQPTAGNGEMVEATHKNGGFSWRLTARYLPSDDSSIYATYARGRRP
EILSPRGPGAPFGAVTFPVLPSETVDSFELGAKAALLDRSLFVDGAVFFYQYENFQTTEQ
QGTQFITTNAGRAESYGFEGQVRWMPNDMLSLFATYAYGHGRFKTGVREGNRFRLSPDHS
ASLGAIVSVPAGPGRVSFSPSVTVQSKIFFDDDNDRPDLQQPPAALVADNIQDEYQDGYA
LVNARLGYESRDGGWRVEAFVENLFDKAYIMDAGNTGDSLGLPTFIAGAPRFYGVALGFR
FGGAR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccggattctcgcgctggctggcgccagcctctcgacgctcgtggccgcgcag
gcccgtgcggaagccgagccagcagatgccgacacgattatcgttaccgcgcagctgcgc
gagcaggatcccatcgccgttcccatggcgctcactgccattggcgcggacgagctggac
cggttcggccttcaggagctggacaagctgtcgcgcttcgtgcccggcttcgtggtgcag
aaccagtctcccaacaatcccggcttcgtcatgcgcggcatcacgtccgacagtggcgcg
gcgaccaacgagccgcgcgtctccgtcttccaggacggcgtctccatatcgaaatcgcgc
ggttcctatgtcgagctgttcgacatcgagcgcgtcgaggtggccaaaggcccgcaatcg
acgctttacgggcgcggcgcgctgaccggcgccgtcaacatcatccagaacaaggcgaag
ctcggccggatcgagggcagtgccgctctgtcctatggcaattatgagagcttcatcggc
gaggcgatggtcaacgcgccgatcggcgacaatgtcgcggtccgtatcgccggccgcgtc
cgccagcgcgacggctatgtcgagaatctgctgggtggcgaggatttcaactcagcggac
accaaggccattcgcggcgccctgcatgcggaagccggcaagctgacgttcgatctcatc
ggcaattaccagaaggaccgcccggccgggacgtccttcaagtccatcgcctataatccg
acagacccggccactggcgcggtgatcggcgaccgtgggcgcaacagcggcgcggcgctg
gtcgcgggcgcggggggatttgaaggcggcaagcccctcgggctcgaccgggaagtgtgg
ggcgtgaccggccttgccaatctggaactggacgaccgcttcacgctcacgtccatcacg
gcctatcgacggttcgaatccctcgagatcttcgacgcggacggcgtttctcttccgatc
ctgaccgccgcggaaggcgccgagggcaagcagttcagtcaggagctgcgccttgccttc
gcgcagggaccactcacggccttcgtgggggccagctatttccatgaggatggcgcgcag
cgcggaccggcccagttcgacgagcgcatggtgctggcgcggctcgcgggcgccctgaac
ggcggcggcgcgattccgggcagggctgcaaccgacccggcgccggccgccctgtttgcc
aatcccgccttcaccggcatgctgctccagggcgtggcgggcgcttatggcgtcgcgctc
tcttccgcgcaggcccaggcgattgccgccaatctcaagagcgctcatctggaaaccagc
acgaacactgctcgcaccaatgcgttcgatctgttcggcgacgtgaccatgcgggtctcc
gaacgcttcgagctgggcgcgggcctgcgctacacgcatgacgacaagcgcagcggttat
accgcgtccgtgctgaacggccgttccatcgtgggcggcttcatcggtgcgctgtcgcag
ccggcggccacgcgcacagccttgctgcaggcgctggccgtgcccggggcggcgaccatc
ccgccttcggcagcctatccggtgccgctcttcggcctgggcgcccagcccacggccggc
aatggcgagatggtggaagcgacgcacaagaatggcggattttcctggcgcctgacggcc
cgctacctgcccagcgacgatagcagcatctatgcgacctatgcgcgcgggcgccggccc
gagatcctttcgcctcggggacccggcgcaccattcggcgcggtgaccttcccggttctt
ccgtccgagacggtcgacagcttcgagcttggcgccaaggcggcgttgctcgaccggagc
ctcttcgtggacggcgcggtcttcttctaccagtatgagaatttccagaccaccgagcag
cagggcacgcagttcatcaccaccaatgcaggcagggcggaaagctacggcttcgagggg
caggtccgctggatgcctaacgacatgctcagcctgttcgcgacctatgcctacggccat
ggacggttcaagacgggcgtgcgggaaggcaaccggttccgcctcagcccggatcacagc
gcatcgcttggcgcgatcgtctccgtgccggctggacccggacgggtcagcttctccccg
agcgtgacggtgcaatcgaagatattcttcgatgacgacaatgaccggccggacctccag
cagccccccgcggcactggtcgccgacaatatccaggatgaatatcaggacggctatgcg
ctcgtgaacgcacggctcggctatgaatcgcgggatggcggctggcgggtcgaagccttc
gtggagaatctcttcgacaaggcgtacatcatggacgcaggcaacacgggggacagcctg
ggcctgccgaccttcatcgcgggcgcgccacgcttctatggcgttgcgcttggcttccgc
ttcggaggtgcccggtga
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