Sphingobium sp. SYK-6: SLG_31170
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Entry
SLG_31170 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_31170
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_31170
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAK67792
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Position
complement(3365687..3368263)
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AA seq
858 aa
AA seq
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MRHFDLLNTGVARMALSLMIAVSAMPVQAQDSPADEADGGGEIVVTATRKSETLSKVPVS
VQAFTQNELVKQGLRNVEDLARMTPGVSLRRGGLGVSNVSIRGISSGAGASTIGVYIDDT
PIQVRSLGVASSIMYPALFDLERVEVLRGPQGTLFGAGSEGGTIRFIQPEPSVTEWSGLA
RGDLSTTTNGKESYEAAFAIGGPLVTDKIGIRASAYFRHEGGFIDKMVGTPVVRNTTGAL
GVQSLSFTNTSLYKADVNSSDTFAARLALTFKPSETITITPSINYQSFFTPDAAPNVWPT
MSNFETADYATPRWNPTIDATHLPLDVDSGEPQRDKFIMPALKIEADLGFADLVSTTSYF
KRDTSQTLDYTNIYAVSYAGRQTPNVGDVAISTVSNRQRNWTQEVRLQSVSDGPLTWVAG
GFYSRNEQQAIQNSQTNFLPFLNPLFGIRNDGAPFGPGYSAFINFYGVPQLNGTSSYLSD
FKAIDTQIAGFADATYELLEGLKVTAGVRVSKNKIEYTAFYDGPANNLNAPRGLACVPGT
GVGTVPCTAVAVGQYEPGTGPFTPRYLNSSASGSDTAVTPKFGISYQATRDTMVYATVSK
GFRPSGAQIALPGNCNPELVQLGYVNAQGQASSPQTYGSDSVWSYEAGAKTRMFGGALQL
NGSVFHIKWSNIQSTVSVQTCLQSLTANLGSATSQGFDLQAVLKPVRELTLMANVGYTDA
TFDDDTIINGRTLYTGGSVLPSSGSPWTVTLSGDFRYPIADKTYYVRADYTYRSKEGRTG
NTDPGSINYDPNQPVNKAYTIVNGRAGIELGDLDLSLYVNNIFNVAPMINLGHTRNQPVF
TTLVTRPRSVGLTAAISF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcggcattttgacctgttgaacactggcgtcgcgagaatggcgctctctctcatgatc
gccgtctccgcgatgcccgtgcaggcgcaggactcgcccgccgacgaggctgatggcggc
ggcgagatcgttgtcaccgcgacccgcaagagcgagacgctctcgaaggttccggtcagc
gttcaggcgttcacgcagaatgaactggtgaagcagggccttcgcaatgtcgaggatctg
gcacgcatgacgccgggcgtatcgctgcgtcgcggtggccttggcgtcagcaacgtctcc
atccgcggcatctcctcgggtgccggcgcctcgacgattggcgtctatatcgacgatacg
cccattcaggtccgttcgctcggcgtcgcctcgtcgatcatgtatccggcgctgttcgat
ctggagcgtgtcgaggtgctgcgtggtccgcagggcactctcttcggcgccggttcggaa
ggcggcacgatccgcttcatccagcccgagccgagcgtgaccgagtggagcggccttgcg
cgcggcgacctctcgacgacgaccaatggcaaggaaagctatgaagcggcgttcgcgatc
ggtggcccgctggtcaccgacaagatcggcattcgcgccagcgcctatttccgtcacgag
ggcggcttcatcgacaagatggtcggcacgccggtcgtgcgcaataccaccggcgcgctc
ggcgtgcagtctctcagtttcaccaacaccagcctctacaaggccgacgtgaactcctcg
gacacgttcgcggcgcgtctcgcgctgacgttcaagccgtccgagaccatcaccatcacg
ccgtcgatcaattatcagagcttcttcaccccggacgctgcgccgaacgtgtggcccacc
atgtcgaacttcgaaacggcggactatgcaacgccgcgctggaacccgacgatcgatgcg
acgcacctgccgctggacgtcgactcgggcgagccgcagcgggacaagttcatcatgccg
gcgctcaagatcgaggctgatctgggttttgcggacctggtctcgaccacgtcctacttc
aagcgcgatacgagccagacgctcgattacaccaacatctacgccgtttcctatgccggg
cggcagacacccaatgtgggtgacgtcgcgatctcgaccgtgtccaaccggcagcgcaac
tggacgcaggaagtgcggctgcaatcggtgagcgacgggccgctgacctgggttgcgggc
ggtttctattcgcgcaacgagcagcaggcgatccagaattcgcagaccaacttcctgcct
ttcctcaatccgctgttcggtatccggaatgacggcgcgccgttcggccccggctacagc
gctttcatcaacttctatggcgttccgcagctgaacggcacgtccagctatctgtcggac
ttcaaggcgatcgacacgcagatcgccggcttcgcggatgcgacctatgaactgcttgaa
gggctcaaggtgacggctggcgtgcgcgtctccaagaacaagatcgaatataccgccttc
tatgatggtccggcgaacaacctgaacgcgccccgtggccttgcctgcgttcccggcacc
ggtgtcggaaccgtgccctgcacggcggtcgcagtcggccagtatgagccgggaacgggc
cccttcacgccgcgctatctgaacagctcggcatccggttcggataccgccgtcacgccg
aagttcggcatctcctatcaggcgacgcgagacaccatggtctatgcgacggtcagcaag
ggcttccgtcccagcggcgcgcagatcgccctgccgggcaattgcaatccggaactggtg
cagcttggctatgtcaatgcccagggtcaggcgagttcgccgcagacttatggttcggac
tcggtctggtcctatgaagccggcgccaagacgcgcatgttcggcggcgcgcttcagctg
aacggcagcgtcttccacatcaaatggtcgaacatccagtcaaccgtttcggtgcagacg
tgcctccagtcgctcaccgccaatctcggctccgcgacgagccagggtttcgatctgcag
gcggtgttgaagccggtgcgcgaactgaccctgatggcgaatgtcggctataccgatgcc
acgttcgacgacgacaccatcatcaacggtcgcacgctctacacgggtggttcggtcctg
ccatcctccggttcgccctggacggtcacgctctccggcgacttccgttatccgatcgcc
gacaagacctattatgtccgcgccgattacacctatcgcagcaaggaaggtcgtaccggc
aataccgacccgggctcgatcaactatgatcccaaccagccggtcaacaaggcctacacg
atcgtcaatggccgggctggcatcgaactcggcgatctggacctgtcgctctacgtgaac
aacatcttcaacgtcgcgccgatgatcaatctgggtcacacccgcaaccagccggtgttc
accacgctggtgacgcgcccgcgcagcgtgggtctgacggcggcaatctccttctga
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