Sphingobium sp. SYK-6: SLG_31330
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Entry
SLG_31330 CDS
T01622
Name
(GenBank) LysR family transcriptional regulator
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssy03000
]
SLG_31330
Transcription factors [BR:
ssy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SLG_31330
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Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BAK67808
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Position
3386441..3387373
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AA seq
310 aa
AA seq
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MDIRELRSFIHVARLGSVNRAAMHLNIAQPALSRQLQKLEETLGVRLFTRSGRGVDLTEA
GALLLGQAEQLINQFDATAELVSGRVHRAQGHVTVGLPPTCGLLIGPELFRRFREQWPNA
TLILREGISSSLEEWLVDRRIDIAVMHNPLPMVGVEIEPLLHEHMVLLSPPDASIADEIR
LRDISRLPLILPALPHSNRRLVERAVAQNGGRLSIVAEVDSVPFVKELVKRGYGHTIQTH
AGAAREEADGTLCLRPIRRPQLVSTLALGVTSGGPQNWLASETAQLVRTIIRSLVERQEW
IGARMMDQAD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgggaattgcggtcgttcatccatgtcgcacgacttgggagcgtcaatcgg
gccgccatgcatctgaacattgcccaaccagcgctcagccgacagcttcagaagctggag
gaaacattgggcgtccggctcttcacccggagcggccggggtgtcgacctgaccgaggcc
ggagctctgctcctcggccaggccgagcagctgatcaatcagttcgacgccacggccgag
ctggtcagcggccgtgttcaccgggcccagggccatgtcaccgttggtcttcccccgaca
tgcgggctgctgatcggccccgagctgttccggcgctttcgcgagcaatggcccaacgcc
actttgatccttcgcgaaggcatcagttcctcgctcgaggaatggctcgttgaccgccgc
atcgacattgcggtcatgcacaatcccctgccgatggtcggcgtggagatcgaaccgctc
ctgcatgagcacatggttctcctctcgccgccggatgcgtcgatcgcggatgaaatccgc
cttcgtgacatctcccgcctgcccctcattctgcctgcgctgccgcacagcaatcgccgg
ctcgtggagcgagcagtggcccagaacgggggccgattgtccatcgtcgcggaggtcgac
agcgtgcccttcgtcaaggaactggtgaagcgggggtatggccataccatccagacgcat
gccggcgccgcgcgcgaggaagcggacggcacgctctgcctgcggccgatccgcaggccg
cagctcgtatcgaccctggcattgggtgtaacgagcggcgggccccagaactggctcgcc
tcggaaaccgcgcagctggttcgaacgatcattcgctcgctcgtcgaacggcaggagtgg
atcggcgctcgaatgatggatcaggccgactga
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