Sphingobium sp. SYK-6: SLG_31890
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Entry
SLG_31890 CDS
T01622
Symbol
smc
Name
(GenBank) chromosome partition protein SMC
KO
K03529
chromosome segregation protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_31890 (smc)
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SLG_31890 (smc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
SMC_hinge
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BAK67864
UniProt:
G2IMS5
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Position
3449219..3452659
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AA seq
1146 aa
AA seq
DB search
MELRRLKLTGFKSFVEPTELRIEIGLTGIVGPNGCGKSNLLEAIRWVMGESSPKSMRGGG
MDDVIFAGTATRPARDFAEVSLLAVQPPGIVLPSIDLGPEGELEVVRRIERGAGSAYRAN
GRDVRAKDVSLIFADAATGPHSPALVSQGKIAAVIAARPAERRAMLEEAAGIAGLHVRRK
DAEQKLRASAANLARLDDILAEMDGRAASLRRQARAAERYTELSEKIQLAEGRALFARYR
EAAQAADQAARDAETAEALVRTAQDAQAAIAGEAQQAIDALAQARATANSAREAAAEARF
RLERLSSERDEFVRRIADLEGQLARMAQDQEREGALAIDAAGAIERLQAEETTLAQRLKE
ARGSLPAFAARLAEAERASRDSEVSLAQAMARLAGEQAERRVAEARLATARQKLARAQGE
VERIATALAQLPDPAPLAERQGAAEQARTQALADRAAAEQLMAAAALARETQTEAVATQQ
RVLAAAKATAAALDSEARALEKGLEGAGKGDRAIDSIGVDPGYERALAAALGDDLQAALG
ENGRARWSGAAITTDDPPLPADCEPLAAHVRAPDALARRLAQIAVAPEDGGQPLHVGQRL
VTLDGRLRRWDGFVAQEGGAAAAERLIRINRLEAIARERPGIVAAVDAAGQALAAAEEAL
REANAQERAARAAASAAEDAARGAERTLAEVATMLERVAGRRADLDRRAAEAAADHAAAE
QEMTGARAALDALPQGEETAAEVALFKTAAERCRAAIGQVQAEQTMVERAIGTDEERHKA
IRAEVSGWRARAGDAARRIADMKARAETLGNDLAAIRGRPEALSAELDALALSAREGAER
AEEARLAEAAAQDALSAAEKRLAAANEALSAAREARAGALARAEHAVARRKDIGQACGER
FACPPPVLPGKLGFASEEVGHAADEQARHDRLVLDRERLGPVNLVAAAELAELEETQAKS
RAESEELTTAINQLRGSIGHLNREGRQRLLAAFEAVNGHFQRLFTTLFEGGSAHLELIES
DDPLEAGLEIMAQPPGKRLTTLTLLSGGEQALTAVALIFGLFLTNPAPICVLDEVDAPLD
DANIERFCGLLDQMVRDTATRYLIVTHNAVTMSRMHRLFGVTMVEHGVSRLVSVDLQAAE
ELLAAE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgccgtcttaagctgaccggcttcaagagcttcgtcgagcccaccgaactg
cggatcgagatcgggctgaccggcatcgtcggccccaatggctgcggcaagtccaatctg
ctcgaagccattcgctgggtgatgggcgaatccagccccaagtccatgcgcggcggcggc
atggacgacgtgatcttcgcgggcacggccacgcgtccggcgcgcgatttcgccgaggtg
agcctgctcgccgttcagccccccggcatcgtgctgccatccatcgatctcgggccggaa
ggcgagctggaagtcgtgcgccgcatcgagcggggcgccggcagcgcctatcgcgccaat
ggccgcgacgtgcgcgcgaaggacgtctcgctcatcttcgccgacgccgccactggcccg
cacagcccggcgctggtcagccagggcaagatcgccgccgtcatcgctgcccggcccgcc
gagcgccgcgcgatgctggaggaagcggccggcatcgcaggcctgcatgtccgccgcaag
gatgccgagcagaagctgcgcgccagtgccgccaatctcgcccggctcgatgacatcctc
gccgagatggacgggcgcgccgccagcctgcgccgccaggcccgcgcggcggagcgctac
acggagctcagcgagaagatccagctggccgagggccgcgccctgttcgcgcgctatcgg
gaagccgcacaggccgccgatcaggccgcccgggacgccgagactgccgaggcgctggtg
cgcaccgcgcaggacgcgcaggccgccatcgccggtgaggcccagcaagccatcgatgcg
ctcgcgcaggcccgcgccaccgccaacagcgcgcgcgaggctgcggcggaagcccgcttc
cggctcgaacgcctgtcctcggagcgggacgagttcgtccgccgcatcgctgatctcgaa
gggcagcttgcccgcatggcgcaggatcaggagcgcgaaggcgcgcttgccatcgatgcc
gccggggcgatcgagcggctgcaggcggaagagacgacgcttgcccagcgcctgaaggaa
gcgcgcgggtccctccccgctttcgccgcgcgcctcgccgaggccgagcgcgccagccgg
gacagcgaggtttcgctcgcgcaggcaatggcacggctcgccggcgagcaggccgagcgc
cgcgtcgcggaggcccgcctcgccaccgcccgccagaagctggcgcgcgcacaaggcgag
gtcgagcgcatcgccaccgcgcttgcccagctgcccgatccggccccgctggcagagcgg
cagggcgcggccgagcaggcccgcacgcaggccctcgcggaccgtgccgctgccgagcag
ctcatggccgccgccgccctcgcccgcgagacgcagacagaggccgtcgccacccagcag
cgcgtgctggcggcggcgaaggccacggcagccgcgctcgacagcgaggcgcgggcgctg
gagaaggggcttgaaggcgcgggcaagggcgatcgcgcgatcgacagcatcggcgtcgat
cccggctatgagcgcgcgctggccgccgcgctcggggacgatctccaggccgccctcggg
gagaatggccgcgcccgctggtccggcgccgcgatcaccacggacgatccgccgctgccg
gccgattgcgagcccctcgccgcgcatgtgcgcgcgcccgacgcgctggcccggcggctg
gcgcagatcgccgtcgcgcccgaggatggcgggcagccacttcatgtcggccagcgcctc
gtcacgctggacgggcgcctgcgccgctgggatggcttcgtcgcgcaggaaggcggcgcg
gccgctgccgaacgcctcattcgcatcaatcggctggaggccatcgcgcgggagcggccc
ggcatcgtggcggcggtggacgcggccggtcaggcgctggctgcggcggaagaggcgctg
cgcgaggccaatgcgcaggagcgcgccgcccgcgccgccgcatcggccgccgaggatgcc
gcgcgcggcgccgaacgcacgctggccgaggtcgcgaccatgctggagcgtgtggcgggc
cgccgcgccgatctggaccgtcgcgccgccgaagccgctgccgatcacgccgcggcggag
caggaaatgaccggcgcccgcgccgccctggatgccttgccgcagggcgaggaaaccgct
gccgaggtcgcgctgttcaagaccgctgccgagcggtgtcgcgccgccatcgggcaagtg
caggccgagcagaccatggtcgagcgggcgatcggcacggacgaggagcgtcacaaggcg
atccgcgcggaagtctccggctggcgcgcgcgggcgggtgacgcggcgcggcgcatcgcc
gacatgaaggcgcgcgccgagacgctgggcaatgatcttgcggcgatacgcggccggccc
gaagccctgtccgccgaactcgacgcgcttgccctgagcgcgcgcgaaggcgccgagcgc
gcggaagaggcccgcctcgccgaggccgccgcgcaggatgcgctcagcgcggcggaaaag
cgcctcgccgccgccaatgaggcgctgtcggccgcgcgcgaggcccgcgccggggcgctg
gcccgcgccgagcatgccgtcgcgcgccgcaaggatatcggccaggcctgcggggagcgc
ttcgcctgcccgccgccggtgctaccgggcaagctcggcttcgccagcgaggaggtgggc
catgccgccgacgagcaggcccggcatgacaggctggtgctcgatcgcgagcgccttggc
ccggtcaatctcgtggcggccgccgagctggccgagcttgaggagacgcaggcgaaaagc
cgcgccgagagcgaggaactcaccaccgcgatcaatcagctgcgcggctccatcggccat
ctgaaccgcgagggccgccagcgcctgctcgccgcgttcgaagcggtcaatggccatttc
cagcgcctgttcaccaccctgttcgaaggcggcagcgcgcatctcgaactcatcgagagc
gacgatccgctggaggccgggctggagatcatggcccagcccccgggcaagcgcctcacc
acgctgacgctgctgtccggcggcgagcaggcgctcaccgccgtggcgctcatcttcggg
ctgttcctcaccaatcccgcgccgatctgcgtgctggacgaagtcgacgcgccgctcgac
gatgccaatatcgagcgcttctgtggcctgctcgaccagatggtgcgcgacaccgcgacc
cgctatctcatcgtcacgcacaatgccgtgacgatgagccgcatgcatcgcctgttcggc
gtcaccatggtggagcacggcgtgagccggctcgtctccgtggatctgcaggcggccgag
gagcttctggccgcggagtga
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