Sphingobium sp. SYK-6: SLG_32090
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Entry
SLG_32090 CDS
T01622
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00030
Pentose phosphate pathway
ssy01100
Metabolic pathways
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SLG_32090 (edd)
Enzymes [BR:
ssy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SLG_32090 (edd)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
zf-A20
Motif
Other DBs
NCBI-ProteinID:
BAK67884
UniProt:
G2IMU5
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Position
3473649..3475484
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AA seq
611 aa
AA seq
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MTDLHPVIARVTERVTARSAASRLRYLDLIERGRDAGTNRDMLSCGNLAHGFAASGEDKP
AIRTGRAMNIGIVTAYNDMLSAHQPYGRYPEAIKIAAREVGATAQVAGGVPAMCDGVTQG
QAGMELSLFSRDTIALSTAIALSHAMFEGALMLGICDKIVPGLLMGALRFGHLPTIFVPA
GPMPSGLANKEKQRIRQLYAEGKVGREELLESESASYHDAGTCTFYGTANTNQMMMEVMG
LHMPGAAFVNPGTRLRSELTRAAVHRVASLGWDGEDYRPLGHCVDEKAIVNAAIGLLATG
GSTNHAIHLPAIARAAGILIDWTDLAELSSVVPLLARVYPNGADDVNHFHAAGGMAWIIT
ELLGNGLLHRDIMTVARADLTDYGRSPMLVDDALVWDEPPTAPGNDAILRPVSDPFSADG
GMKLLAGNLGRCIMKTSAVDPARWTIEAPARVFAGQDEVMEAFKAGELDRDVVVVVRFQG
PRANGMPELHKLTPPLGVLQDRGFKVALVTDGRMSGASGKVPAAIHLSPEALGGGPVGKL
RDGDIVRVCAVEGRLEALVNEAEWAARPQAEAPPPPFDTGRELFALFRHHSDVAEAGASP
ILAAMDRDIAL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccttcatcccgtcatcgcgagagtgaccgagcgggtcacggcgcgcagtgcc
gcgagccggctgcgctatctcgacctcatcgagcgcgggcgcgacgccggcacgaaccgg
gacatgctctcctgcggcaatctggcccatggcttcgcggcgagcggcgaggacaagccc
gcgatccgcaccggccgggccatgaacatcggcatcgtcaccgcctataacgacatgctc
tcggcccatcagccttatgggcgctatcccgaggcgatcaagatcgccgcgcgggaagtg
ggcgccaccgcgcaggtggccggcggcgtgcctgccatgtgcgacggcgtcacgcagggg
caggccggcatggagctctcgctcttctcgcgcgacaccattgccctctcgaccgccatc
gcgctcagccatgcgatgttcgaaggcgcgctgatgctgggcatctgcgacaagatcgtg
ccggggctgctgatgggcgcgctgcgctttggccatctgccgaccatcttcgtgccggcc
ggcccgatgccctcgggcctcgccaacaaggagaagcagcgcatccgccagctctatgcc
gagggcaaggtcggccgcgaggagctgctggagagcgaatccgccagctatcacgatgcc
ggcacctgcactttctacggcactgccaacaccaaccagatgatgatggaagtgatgggc
ctgcacatgccgggcgccgcgttcgtcaatccgggcacgcggctgcgcagcgagctgact
cgtgccgccgtgcatcgcgtggcgtcgctcggctgggacggcgaggattatcgcccgctc
ggccattgcgtggacgagaaggcgatcgtgaatgccgccatcggcctgctcgccaccggc
ggctcgaccaaccatgccatccacttgcccgccatcgcccgcgcggccggcatcctcatc
gactggacggacctggccgagctgtcctcggtcgtgccgctgctcgcgcgagtctatccc
aatggcgcggacgacgtgaaccatttccacgctgccggcggcatggcgtggatcatcacg
gagctgctcggcaatggcctgctccaccgtgacatcatgaccgtcgcgcgcgctgacctc
accgattatggccgcagccccatgctggtggacgacgcgctggtctgggacgagccgccc
acggcgcccggcaatgacgcgatcctgcggcccgtctccgatcccttcagtgccgatggc
ggcatgaagctgctcgccggcaatctcggccgctgcatcatgaagaccagcgcggtggac
ccggcgcgctggacgatcgaggcgcccgcccgcgtgttcgccgggcaggacgaggtcatg
gaagccttcaaggccggcgagctggaccgcgacgtggtcgtggtcgtccgcttccagggc
ccgcgcgctaatggcatgccggagctgcacaagctcaccccgccgctcggcgtgctgcag
gaccggggcttcaaggtcgcgctggtgacggacgggcgcatgtccggcgcgagcggcaag
gtgcctgccgcgatccatctctcgcccgaggcgctgggcggcggcccggtcggcaagctg
cgcgatggcgacatcgtgcgcgtctgcgccgtggaaggccggctggaagcgctggtgaac
gaggccgagtgggccgcgcgcccgcaggccgaggccccgcccccgccgttcgacaccggc
cgcgagctgttcgccctgttccgccatcacagcgatgtcgcggaggccggcgcctcgccc
atcctggcggcaatggaccgggacatcgcgctgtga
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