Sphingobium sp. SYK-6: SLG_33080
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Entry
SLG_33080 CDS
T01622
Name
(GenBank) OOP-family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_33080
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_33080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Opacity
OmpA_membrane
Surface_Ag_2
Motif
Other DBs
NCBI-ProteinID:
BAK67983
UniProt:
G2INK4
LinkDB
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Position
complement(3576052..3577116)
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AA seq
354 aa
AA seq
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MRKLGIAIALASTAMASPSLAKDKSWYIGAEVGAMIAEDADSTYDNGVTANTPHKTGYDA
GGMVGYDFGGFRLEAEYSHKKAMNKQTNYSNLSTNLSGGQMRIDSLMLNGLLDFGPDDGL
QGFIGGGVGIARSKISLPDTRDSDSGFAWQALAGVRYPVTTNVDLSLKYRYFNHDDIKLR
NTRGVGLESEASTHSILAGIIYNFGGAEPAPPPPPPPPPPPPPPPPPPPPPPPPPVVQCA
PGPYIVFFEWDSADITPDAASILDNAISAYANCGSASVMLAGHADKSGSPRYNMGLSARR
NTAVRGYLTSRGISDGVISSEAFGETRPRVETADGVRELQNRRVEITYGPGSGN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttggcattgccatagcgctcgcgtcgactgcgatggcctcgccatcgctg
gccaaggacaagtcctggtacattggtgccgaagttggcgcgatgatcgccgaggacgcg
gactcgacgtatgataatggcgttaccgcgaacacgccgcacaagaccggctatgatgcc
ggcggcatggtcggctacgacttcggcggtttccgtctcgaagcggaatattcgcacaag
aaggcgatgaacaagcagaccaactattcgaacctctcgacgaacctgtcgggcggccag
atgcgcatcgactcgctgatgctcaacggtctgctcgatttcggtccggacgatggtctg
cagggcttcatcggcggtggcgtcggtatcgctcgttcgaagatctctctccccgacacg
cgcgattcggacagcggcttcgcctggcaggctctcgccggcgtccgttatccggtgacc
accaacgtcgatctgtcgctgaagtatcgctacttcaaccacgacgacatcaagctgcgg
aacacccgtggcgtgggtctcgagtccgaggcaagcacgcacagcatcctggcgggcatc
atctacaacttcggtggcgccgagccggctccgccgccgcctcccccgccgccgccgccc
ccgccgccgcctcccccgccgcctccgccgcctccgcctccgccggtggtgcagtgtgcg
cctgggccgtacatcgtgttcttcgagtgggatagcgccgacattacgccggacgctgcc
tcgatcctcgacaacgcgatctcggcttatgccaactgcggcagcgcgtcggtcatgctg
gccggtcacgcggacaagtcgggctcgccccgctacaacatgggtctgtcggctcgccgc
aacacggcggtgcgcggttacctgacctcgcgtggcatttcggacggcgtgatttcgtcc
gaggccttcggtgagacccgtccgcgcgtcgaaaccgccgatggcgtccgtgaactccag
aaccgtcgcgtggaaatcacctacggtccgggttcgggcaactaa
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