Sphingobium sp. SYK-6: SLG_34040
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Entry
SLG_34040 CDS
T01622
Name
(GenBank) putative helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssy03029
]
SLG_34040
Enzymes [BR:
ssy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SLG_34040
Mitochondrial biogenesis [BR:
ssy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SLG_34040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAK68079
NITE:
SLG_34040
UniProt:
G2IP98
LinkDB
All DBs
Position
complement(3673375..3676125)
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AA seq
916 aa
AA seq
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MSRLASAALKAVLGPTNTGKTHLAIERMCGHSSGLMGFPLRLLAREVYERVVRIKGADQV
ALLTGEERVIPPAARYVLATAEAMPVRGGLGAMRDFAFVAVDEIQLAADPERGHVFTDRM
LHARGREETMLLGSASMAPLVRSLLPRAEIVSRPRFSTLRYAGAAKLSRLPRRSAIVAFS
VEEVYRVAELLRRHRGGAAVVMGALSPATRNAQVAMFEAGEVDYLVATDAIGMGLNLNVD
HVAFASLRKFDGQRTRRLTVAEMAQIAGRAGRHQRDGTFGDVGALDGPPAFSPEEVERIE
EHRFDPIEQIFWREADLPMDHVGTLIEALTERPRREGLRAAPEAVDLAVLRALADMPDVG
ARARGPAQVGRLWAACSLPDFQKLGIEHHARTVHRLWDWLSQGNGHIPQDWFAGQLARLD
NVQGDVDALAGRIAAVRTWAYVAQRDDWLAQPVEMAARARALEDRLSDALHGALRQRFVD
RRTSALLRRGGDANAFLAVDVDDAGNVTVDGYKIGTMRGFRFAVDPTARAGEKRLLLAAA
ERRLGAHLNEMAQALLAVDDKAFSLASPPGGDAQIIWNGHPVATLRSGQRLLAPDIALDA
GLGALAPEIQQGVRDRLSVWIRGQLERHVPALLKMEAGAIDPALPPPVRAVLAQLADDGG
IMSRTALDESLAQVAKEDRTHLRKAGVVIGVLDLYHPGLMKPSAAQWRMALLALRRGEPL
VALPPAGAVLLPASEELDEVGARVAGFRKLGEAWLRIDMAERLARGAHDAIAAGKAYGAD
DPTIVSIGLNEASFLDLMRQAGFRPVPDAAEGAPNWQFKGRPKARPRPEGERRRQPGQRA
GHPRGDKPQNRGDRKDARGEGRKSGRPDERQGKGGDRKPRPHDRGDGGRDRAPQPRQIVA
TGKALAGLGALLGRED
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccttgcttctgctgccctcaaggctgttctcggaccgaccaacaccggcaag
acgcatctcgccatcgagcggatgtgcggtcattcgagcggcctcatgggctttcctctc
cggctgctcgcgcgcgaggtctatgagcgcgtggtgcggatcaagggcgcggatcaggtg
gcgctgctcactggcgaggagcgcgtcattcccccggccgcacgctatgtgctggcgacg
gccgaggcgatgccggtgcgcggcgggctgggcgccatgcgggatttcgccttcgtcgcc
gtcgatgagatccagctcgcggccgatcccgagcgcggccatgtcttcacggaccggatg
ttgcacgcgcgcgggcgcgaggagacgatgctgctcggctcggcgagcatggcgccgctt
gtccgttcgctgctgccgcgcgccgagatcgtctcgcgcccgcgtttctccaccctgcgt
tatgccggcgcggcaaagctctcgcgcctgccccggcgctccgccatcgtcgccttctcg
gtagaggaagtctatcgcgtcgcggaattgctgcggcgtcatcgcggcggcgcggcggtg
gtgatgggcgcgctcagccccgcgacccgcaatgcccaggtcgcgatgttcgaggcgggc
gaggtcgattatctggtggcgacggacgccatcggcatgggtctcaatctcaatgtcgat
catgtcgccttcgcgtcgctgcgcaagttcgacgggcagcgcacgcgccgcctgacggtg
gcggagatggcgcagatcgccgggcgggcggggcgccaccagcgcgacgggacgttcggc
gatgtcggcgcgctcgatgggccgccggccttctcgcccgaggaagtcgagcggatcgag
gagcaccgcttcgatcccatagagcagatcttctggcgggaagccgatctgccgatggat
catgtcggcacgctgatcgaggcgctgaccgagcggccccggcgcgaggggctgcgcgcc
gcgccggaagcggtcgatcttgcggtgctgcgggcgcttgccgacatgccggacgtgggc
gcgcgcgcgcgcggaccggcgcaggtggggcggctctgggcagcctgttccctgccggat
ttccagaagctcggcatcgagcatcatgcccgcacggtgcatcgcctgtgggactggctg
agccagggcaatggccacatcccgcaggactggttcgccgggcagctcgcgcggctcgac
aatgtgcagggcgatgtcgatgcgctggccgggcgaatcgcggcggtgcgcacctgggcc
tatgtcgcgcagcgggacgactggcttgcccagccggtcgagatggcggcgcgcgcccgt
gccctggaggatcggctgtccgacgcgctgcatggcgcgctgcgccagcgtttcgtggat
cggcgcacgtccgcgctgctgcgtcgcggcggcgatgcgaatgcgtttttggcagtggac
gtggacgatgcaggcaatgtaacagtcgacgggtacaagatcgggacgatgcgcggattc
cgcttcgccgtcgatccgactgcaagggcaggcgaaaagcggttgctgttggccgctgcc
gaacggagactgggtgcacatttgaacgagatggctcaggcattgctggcagtggacgac
aaggcgttcagcctcgccagccctcccggaggtgacgcacagatcatctggaacgggcac
cccgtcgcgactctcaggtcggggcagcggctgctcgcgcccgacatcgctctggatgcg
gggctcggcgcgctggcgccggagatccagcagggcgtgcgggatcgcctctccgtatgg
atcaggggccagctcgagcggcatgtgccggccctgctcaagatggaagccggcgcgatc
gatccggcgctgccgcccccggtgcgcgcggtgctggcccagcttgccgacgatggcggc
atcatgtcgcggacggcgctcgacgaatcgctcgcccaggttgccaaggaggatcgcacg
catctgcgcaaggcgggcgtggtgatcggcgtgctcgatctttatcatcccggcctcatg
aagccctcggcggcgcagtggcgcatggctctgctggcgctgcggcgcggcgagccgctg
gtggcgctgccgcccgcgggcgcggtcctgctgccggcgtccgaggagcttgatgaagtg
ggcgcgcgcgtggcgggcttccgcaagctgggcgaggcctggctgcgcatcgacatggcc
gagcggctggcgcgcggcgcgcatgacgcgatcgcggcgggcaaggcctatggcgcggat
gatccgaccatcgtgtcgatcggcctcaacgaagcgagcttcctggatctcatgcggcag
gccggcttccggccggtgcccgatgcggcggaaggcgcaccgaactggcagttcaaggga
cggccgaaagcgcgtccccggccggaaggcgagcggcgccgccagcctggccagcgtgcc
ggtcacccgcgcggcgacaagccgcagaaccggggcgatcgcaaggatgcgcgcggcgag
gggcgcaagtccggccggccggacgagcggcagggcaagggcggcgatcgcaagccgcgc
ccccatgatcggggcgatggcgggcgggatcgcgcaccgcaaccaaggcagatcgtcgcc
acgggcaaggcgcttgccgggctcggcgcgctgctgggccgcgaggactga
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