Sphingobium sp. SYK-6: SLG_34380
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Entry
SLG_34380 CDS
T01622
Symbol
argF
Name
(GenBank) ornithine carbamoyltransferase
KO
K00611
ornithine carbamoyltransferase [EC:
2.1.3.3
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00220
Arginine biosynthesis
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01230
Biosynthesis of amino acids
Module
ssy_M00844
Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
SLG_34380 (argF)
Enzymes [BR:
ssy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.3 ornithine carbamoyltransferase
SLG_34380 (argF)
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Motif
Pfam:
OTCace
OTCace_N
OCD_Mu_crystall
Motif
Other DBs
NCBI-ProteinID:
BAK68113
UniProt:
G2IPD2
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Position
complement(3712378..3713313)
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AA seq
311 aa
AA seq
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MTRHFLNLSDAGGDAIAAMLSDAMDRKAARTAAGLPRGAADADAPLAGRTLAMIFEKNST
RTRVSFDMAIRQLGGTSLILDSGTTQLGRGETIADTARVLSRMVDAIMIRTDDHAKIDEM
AHHADVPVINGLTDLSHPCQIVADLLTVAEHGLALPGSQWAWLGDGNNVLHSIIEAAGLF
RFDVRVGVPQGYDPDPRFAQAAQALGANITLTRDAAEAVTGADVVVTDTWISMGQAGGDV
KLKAMMPYQVTPALMARARPDARFLHCLPAHRGEEVTAEVIDGPQSLIWDEAENRLHAQK
SVLRWCFGQLG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcatttcctcaatctctcggacgccgggggcgatgcgatcgcggcgatgctg
agcgacgccatggatcgcaaggccgcgcggacggcggccgggctgccccggggcgcggcg
gatgcggacgcgcccctcgccgggcgcacgctggcgatgatcttcgagaagaactcgacg
cgcacccgcgtcagcttcgacatggcgatccgccagctcggcggcacgtcgctcatcctg
gacagcggcacgacccagctcgggcgcggcgagacgatcgccgatacggcgcgcgtgctc
tcgcgcatggtcgatgcgatcatgatccgcaccgacgatcatgccaagatcgatgaaatg
gcgcatcatgccgacgtgccggtcatcaatggcctcactgatctgtcgcatccctgccag
atcgtcgcggacctgctgacggtcgccgagcatggcctcgcgctgcccggcagccagtgg
gcctggctgggcgacggcaacaatgtgctgcattcgatcatcgaggcggcgggcctcttc
cgcttcgacgtgcgcgtgggcgtaccgcagggctatgatcccgatccccgcttcgcgcag
gccgcgcaggcgctaggcgcgaacatcacgctgactcgcgatgcggccgaggcagtgacc
ggcgcggacgtcgtggtcacggatacttggatctccatgggtcaggccggcggcgacgtg
aagctgaaggccatgatgccttatcaggtgacgcccgcgctcatggcccgcgcccgcccg
gacgcgcggttcctccactgcctgcccgcgcatcgcggcgaggaagtgacggccgaggtg
atcgatggcccgcagtcgctgatctgggacgaagcggaaaatcgcctgcatgcgcagaag
tccgtcctgcgctggtgcttcgggcagctcggctga
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