Sphingobium sp. SYK-6: SLG_34390
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Entry
SLG_34390 CDS
T01622
Symbol
argD
Name
(GenBank) acetylornithine/succinyldiaminopimelate aminotransferase
KO
K00821
acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.11
2.6.1.17
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00220
Arginine biosynthesis
ssy00300
Lysine biosynthesis
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01210
2-Oxocarboxylic acid metabolism
ssy01230
Biosynthesis of amino acids
Module
ssy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
ssy_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SLG_34390 (argD)
00220 Arginine biosynthesis
SLG_34390 (argD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssy01007
]
SLG_34390 (argD)
Enzymes [BR:
ssy01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.11 acetylornithine transaminase
SLG_34390 (argD)
2.6.1.17 succinyldiaminopimelate transaminase
SLG_34390 (argD)
Amino acid related enzymes [BR:
ssy01007
]
Aminotransferase (transaminase)
Class III
SLG_34390 (argD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAK68114
UniProt:
G2IPD3
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All DBs
Position
complement(3713310..3714512)
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AA seq
400 aa
AA seq
DB search
MSITPLMPVYPRCEVRPVRGEGCYLIGERGERYLDFAAGIAVNALGHGHPHLVKAIAEQA
ATLMHVSNLYGSPQGEALAKRIVDNSFADTVFFTNSGAEAVECAIKTARRYHYANGNPQR
HKLITFKNAFHGRTLGAISATDQPKMRDGFEPLLPGFDYVAFNDLEGALAKIDDETAGFL
VETVQGEGGMTAGTPDFITGLRRAADEHGLLLILDEVQCGYGRTGKFFAHEHYGIIPDIM
AVAKGIGGGFPLGACLATEEAAKGMVFGTHGSTYGGNPLAMAAGMAVLDVMLEPGFFDRV
AQMGERLRQAFEQLIPNHDDLFEEIRGKGLMLGIKMKEPAVARDFVAHLRDNHGLLTVAA
GENVFRVLPPLVIEDSHISEAIEKLSAGAASYRLPEPAAS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaccccgctcatgcccgtttatccccggtgtgaggtgcgtccggtgcgcggc
gaaggctgctatctcatcggcgagcgcggcgagcgctatctggacttcgcggcgggcatc
gcggtgaacgcgctcggccatggccatccccatctggtgaaggcgatcgcggagcaggcg
gcgacgctgatgcacgtctccaatctctacggttcgccgcagggcgaggcgctggcgaag
cgcatcgtcgacaacagctttgccgataccgtgttcttcacgaacagcggcgcggaagcg
gtggagtgcgcgatcaagacggcgcggcgttaccattacgcgaatggcaatccgcagcgg
cacaagctcatcacgttcaagaacgcgttccatggccgcacgctcggcgcgatcagcgcg
actgaccagcccaagatgcgcgacggcttcgagccgctgctgcccggcttcgattatgtg
gccttcaatgatctcgaaggcgcgctggcgaagatcgacgacgagacggccggtttcctc
gtggagacggtgcagggcgaaggcggcatgacggcgggcacgccggacttcatcaccggc
ctgcgccgggcggccgacgagcacgggctcctgctgatcctggacgaagtgcagtgcggc
tatgggcgcacgggcaagttcttcgcccatgagcattacggcatcatcccggacatcatg
gcagtcgccaagggcattggcggcggcttcccgctcggcgcctgcctcgcgaccgaagag
gccgcgaagggcatggtgttcggcacgcatggctccacttatggcggcaatccgctcgcc
atggccgcgggcatggcggtgctggacgtgatgctggagcccggcttcttcgatcgcgtc
gcgcagatgggcgagcggcttcgccaggccttcgagcagctcatccccaatcacgacgat
ctcttcgaggagatccggggcaaggggctgatgctcggcatcaagatgaaggagccggcg
gtggcgcgggatttcgtcgcgcatctgcgggacaatcacgggctgctgaccgtcgcggcg
ggcgagaatgtgttccgcgtgctgcccccgctggtcatcgaggatagccacatcagcgaa
gcgatcgagaagctctccgccggcgcggcgagctaccggctgcccgagcctgccgcatca
tga
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