Sphingobium sp. SYK-6: SLG_34680
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Entry
SLG_34680 CDS
T01622
Name
(GenBank) HlyD family secretion protein
KO
K02005
HlyD family secretion protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SLG_34680
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Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_YknX
Beta-barrel_RND_2
BSH_CusB
Beta-barrel_AprE
BSH_CzcB
CzcB_C
HH_EMRA
BSH_YhbJ
Biotin_lipoyl
DUF4407
BSH_YknX
RND-MFP_C
DUF8044
YknX_C
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
BAK68143
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Position
complement(3747355..3748713)
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AA seq
452 aa
AA seq
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MADQDLDAFLGVKPQPAWRRHLKWVLLALGLLLLLWIALRFFGGSDAPRYVTTPVERGHL
VTTVSATGKLAPTNQVTVGSQLSGLVVRVLVDVNDRVAEGQPLAEIDPEQIEDQIRQGRA
QLAANQAQVGQAEATLAEAKAQLARLEEVARLSGGRVPSGTELQAGRANMQRAQAALKVA
QANVLASQASLSQSQTQRARAIIRSPVSGVVLARQVDPGQTVAASFNTPTLFVIAEDLSK
MKLEVAIDEADVGAVKEGQSATFTVDAFPGRTFPATITRVDIGSNLSASTASASSTTAST
AATSSQVVSYAADLSVANAELELRPGMTATADIVTSDKQNVLLVPNAALRFTPSVPVAGQ
SSGITGALSIGPRRRNNTERSVTLERGAVQTVYVKGEDGQPRAVQITTGDTDGTRTEVLS
GDLKPGMEVIVSQLSGAAAAAGGASRRGGGGG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagacctcgatgcctttctgggcgtgaagccgcaaccggcgtggcgccgt
catctgaaatgggtcctcctcgcgctgggcttgctcttgctactgtggatcgcgctgcgc
tttttcggcgggtccgacgcgccgcgctatgtcaccacgccggtcgagcgcgggcacctc
gtcaccaccgtctccgcgaccggcaagctcgcgccgaccaatcaggtgacggtcggttcg
caattgtcgggcctcgtcgtgcgcgtgctggtggacgtcaatgatcgggtggccgagggc
cagccgctcgccgagatcgaccccgagcagatcgaggaccagatccggcaaggccgcgcc
cagctcgccgcgaaccaggcgcaggtcgggcaggcggaagcgacgctggcggaagccaag
gcgcaacttgccaggctggaggaagtcgcccggctctcgggtggccgcgtgccatcgggc
acggagctgcaggccggtcgcgccaatatgcagcgcgcgcaggcggcgctcaaggtggcg
caggccaatgtgctggccagccaggcgtcattgtcgcagagccaaacccagcgcgcccgg
gcgatcatccgctcgcccgtctcgggcgtcgtgctggcgcgtcaggtcgatcccggccag
accgtggcggcgtcgttcaacacgcccaccctgttcgtcatcgccgaggatctttccaag
atgaagctggaagtcgccatcgacgaggcggatgtcggcgccgtgaaggaagggcagagc
gccaccttcaccgtggatgccttccccggcaggacgttcccggcgacgatcacgcgcgtc
gacatcggctccaatctctcggcttccacggcgagcgcttcctcgacgaccgcgtcgacc
gcagccacgagcagccaggtggtctcttacgccgcggatctctccgtcgccaatgccgag
ctggagctgcgccccggcatgaccgccacggcggacatcgtgacgtcggacaaacagaat
gtcctgctcgttcccaatgccgcgcttcgcttcaccccgtccgttccggtggccgggcag
agcagcggcatcaccggcgcgctttcgatcggtccgcgccgccgcaacaacacggaacga
tccgtcacgctcgagcgcggcgcggtacagacggtctatgtgaagggcgaggacgggcag
ccgcgcgccgtgcagatcaccaccggcgacacggacggcacacgcacggaagtgctctcg
ggcgatctcaagcccggcatggaggtgatcgtcagccagctgagcggcgcggcggcagcg
gcgggcggggcatcgcggcggggaggcggcggtggctga
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