Sphingobium sp. SYK-6: SLG_34810
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Entry
SLG_34810 CDS
T01622
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00630
Glyoxylate and dicarboxylate metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SLG_34810 (glcD)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
SLG_34810 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BAK68156
UniProt:
G2IPH5
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Position
complement(3762644..3764125)
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AA seq
493 aa
AA seq
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MPEPDGAVLARRTQIAASLRALVPGVRVIDHPDELRPYECDGLTAYRQPPMLVVLPETTA
QVSRILGWCQAEGVKVVPRGAGTSLSGGALPLADCVLLSLARFNRILSVDYDDRLAIVQP
GVTNLAVTQAVEDRGFYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTTNNVLGVELVL
MSGEIVRLGGTTLDSPGLDLLGLVVGSEGLLGVVTEVTVRILPKADAARALLIGFAAVED
AGACVAAIISHGIIPAGMEMMDRIAIHAAEAFVHAGYPLDVEALLIVELDGPEAECGFLV
GEVERIARANGAVLLRTSGSEAERNLFWAGRKAAFPAVGRVSPDYYCMDGTIPRRRLPEV
LSRMAALSEQYGLGVANVFHAGDGNLHPLILYDASRPGDLEKAEAFGADILRLCVEVGGV
LTGEHGVGVEKRDLMPEMFTALDLDQQQRMKCAFDPGQLLNPGKVFPTLHRCAELGRMHV
HRGALPFPELPRF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaccggacggcgccgtgctcgcgcgtcgcacgcagatcgcggcgtcgttgcgc
gcgctggtgccgggcgtgcgcgtcatcgatcatccggacgagctgcgtccctatgaatgt
gacgggctcaccgcctatcgccagccgccgatgctcgtggtgctgccggagacgacggcg
caggtttcgcgcatccttggctggtgccaggcggaaggcgtcaaggtcgtgccgcgcggg
gcgggcacgtccctctcgggcggtgcgctgcctctcgccgactgcgtgctgctttcgctg
gcgcgcttcaatcggatcctgtcggtggactatgatgatcgcctcgccatcgtgcagccg
ggcgtcaccaatcttgccgtgacgcaggcggtggaggaccggggcttctattacgcgccc
gacccgtcgagccagatcgcctgttcgatcggcggcaatgtcgcggagaattcggggggc
gtgcactgcctgaaatatgggctgacgaccaacaatgtgctgggcgtggaactggtgctg
atgagcggtgagatcgtgcgcctcggcgggacgacgctcgattcgccggggctcgacctg
ctgggactggtggtgggctccgaggggctgctcggcgtcgtcaccgaggtgacggtgcgg
atactgccgaaggcggatgcggcacgtgcgctgctcatcggtttcgcggcggtcgaggat
gccggcgcctgcgtggcggcgatcatcagccatggcatcatccccgccggcatggagatg
atggatcgcattgccatccatgccgccgaggccttcgtccatgccggctatccgctcgat
gtcgaggcgctgctgatcgtggagctggatggaccggaagcggagtgcggctttctcgtc
ggcgaggtggagcggatcgcgcgggccaatggcgccgtgctgctgcgcacgtccggcagc
gaggcggagcgcaatctcttctgggcggggcggaaagcagccttccccgccgtgggccgc
gtctcgccggattattattgcatggacggcaccattccccgccgtcgcctgcccgaagtg
ctcagccggatggccgcgctttccgagcaatatgggctgggcgtggccaatgtcttccac
gccggcgacggcaatctgcatccgctgatcctctatgatgcgagcagaccgggcgatctc
gaaaaggccgaggcattcggcgcggacatcctgcgcctgtgcgtggaggtgggcggcgtg
ctgaccggggaacatggtgtgggcgtggagaagcgcgacctcatgcccgagatgttcacg
gcgctggatctcgaccagcagcagcgaatgaaatgcgctttcgaccccgggcaattgctc
aatcccggcaaggtcttccctacactgcatcgctgcgcggagctggggcggatgcatgtg
caccgcggcgctctgcctttccctgaactcccccgcttctga
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