Sphingobium sp. SYK-6: SLG_36380
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Entry
SLG_36380 CDS
T01622
Name
(GenBank) penicillin binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00550
Peptidoglycan biosynthesis
ssy01100
Metabolic pathways
ssy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SLG_36380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_36380
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssy01003
]
SLG_36380
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssy01011
]
SLG_36380
Enzymes [BR:
ssy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SLG_36380
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SLG_36380
Glycosyltransferases [BR:
ssy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SLG_36380
Peptidoglycan biosynthesis and degradation proteins [BR:
ssy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SLG_36380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BAK68313
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All DBs
Position
3912699..3915113
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AA seq
804 aa
AA seq
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MRRRWRWLTYAALALLTALLLFWLLFARGLPDAKSLLDYEPPLPTVVRDIAGEPIYSFAR
ERRVQLQYSDFPPVLINAYLSAEDKTFFSHHGLDFPGLFRAAAQGIMSGQTPRGTSTITQ
QVAKNLLVGNEVSYSRKLKEAILAWRMESVLTKEQILELYLNQIFLGRNAYGVQAAARAY
YDKDVADLTLPEAAYLAILPKGPANYRPEVHMERALERRNWVLGEMLKNGFINRAQHDAA
VREPLGTVQQRGSGYSNVGGYYIEEIRRRLIAEFGESAEDGPNSVYAGGLWVRSPISPFM
QDHAARALREGLLRYDSGKGWSGPIAKVDVDRWQSELAVSNIDVDYADWTVAVVLSKSGT
SAEIGLRDGSTSTLPRSLAMLVDRRTGQPTFDSLKPGDIIAVKPEGNGYALRNIPGVSGG
MMIEDVHTGRVYAMQGGFDARLSSYNRVTQAMRQPGSTIKPFVYASALDNGMTPATIIVD
GPFCVWQGGNLGQKCFRNFSGSGAGAQTMRWGIEQSRNLMTVRTASQTGMERVVRTIKNM
GIGDYQPYLAFALGAGETTVERMVNAYAMLANHGRQLTPKVMDYVQDRSGKVIWPLNWRP
CQDCNRADWDGKPMPRFPQAGRPVMNPMTAYQMVHITEGVIQRGTATSLRDLDRPLFGKT
GTTNGPTNVWFVGGSPDIVAGVYLGYDQPRNMGGYAQGGTLAAPIWKAAMAPILKDMPKT
PFVAPTGVRMVRIDRRSGRRVYGGWPSDDPRSAIIWEAFKPETEPRISMRRDELADRAKE
DSRTGGNARRDVSRDFAGEQGGIY
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgctggcgctggctgacctatgccgcgctggcgctgctgaccgccctgctg
ctgttctggcttctcttcgcgcggggcctgcccgacgccaagagcctgctggactatgag
ccgccactcccgaccgtggtgcgggacatcgccggcgagcccatctacagctttgcccgc
gagcggcgcgtccagctgcaatattccgatttcccgcccgtcctcatcaacgcctatctc
tcggccgaggacaagaccttcttcagccatcatggcctggacttccccggcctcttccgg
gccgcggcgcagggcatcatgagcggccagacgccgcgcggcacctccaccatcacccag
caggtggccaagaacctgctggtcggcaatgaagtgagctacagccgcaagctcaaggaa
gcgatcctcgcctggcgcatggaaagcgtgctgaccaaggagcagatcctcgaactctat
ctcaaccagatcttcctcggccggaacgcctatggcgtgcaggcggcagcgcgggcctat
tatgacaaggacgtcgccgacctgacgctgcccgaagcggcctacctcgctatcctcccc
aagggcccggccaactaccggcccgaggtccacatggagcgagcactcgaacggcgcaac
tgggtgctgggcgagatgctcaagaacgggttcatcaaccgcgcgcaacatgacgccgcc
gtccgtgagccgctcggcacggtgcagcagcgtggcagcggatacagcaatgtcgggggc
tattatatcgaggaaatccggcggcggctgatcgccgagttcggcgaaagcgcggaagac
gggccgaacagcgtctatgccggcggcctgtgggtgcgctcgccgatctcgcccttcatg
caggaccatgccgcgcgcgcactgcgcgaagggttgctgcgctacgattcgggcaaggga
tggtccgggccgatcgccaaggtcgacgtggaccgctggcagagcgaactcgccgtctcc
aatatcgatgtcgactatgccgactggacggtcgcggtggtgctgagcaaatccggaacc
agcgccgagatcggcctgcgcgacggcagcacctcgacgctgccgcgcagcctcgcgatg
ctggtggaccggcgcaccggccagccgaccttcgattcgctgaagcccggcgacatcatt
gcggtgaagccggaaggcaatggctatgcgctgcgcaacattcccggcgtctcgggcggc
atgatgatcgaagatgtccacaccggccgggtctatgcgatgcagggcggcttcgatgcg
cgcctctcctcctacaaccgggtgacgcaggcgatgcgccagcccggatcgaccatcaag
cccttcgtctatgcctcggcgctcgacaatggcatgacgcccgcgaccatcatcgtcgat
gggccgttctgcgtctggcagggcggcaatctggggcagaaatgcttccgcaacttctcc
ggcagcggggctggcgcgcagacgatgcgctggggcatcgagcaatcgcgcaatctcatg
acggttcgcaccgcatcgcagaccggcatggaacgcgtcgtgcggaccatcaagaacatg
gggatcggcgactaccagccctatctggccttcgcgctcggcgccggggagaccaccgtc
gagcggatggtcaatgcctatgccatgctcgccaatcacggccgccagctgacgcccaag
gtcatggattatgtgcaggaccgcagcggcaaggtgatctggccgctcaactggcgcccc
tgccaggactgcaaccgcgccgactgggacggcaagcccatgccgcgcttcccgcaggcc
ggccgcccggtgatgaaccccatgaccgcctatcagatggtccacatcaccgagggcgtc
atccagcgcggcacggcaacctctctgcgtgacctcgatcgccccctgttcggcaagacc
ggcacgacgaatggcccgaccaatgtgtggttcgtcggcggatcgcccgacatcgtggcc
ggcgtctatctgggctacgaccagccgcgcaacatgggcggctacgcacagggcggaacg
ctggcggcgccgatctggaaagcggcgatggcgcccatcctcaaggacatgccgaaaacc
cccttcgtcgcgccaaccggcgtgcggatggtgcggatcgatcgccgcagcggccgccgg
gtctatggcggctggccatccgacgatccgcgcagcgccatcatctgggaagcgttcaag
cccgaaacggaaccgcgcatctccatgcgccgcgacgaactggccgaccgtgccaaggaa
gacagccgcaccggcggaaacgcgcggcgcgacgtgagccgtgacttcgcgggcgagcag
ggcgggatctactga
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