Sphingobium sp. SYK-6: SLG_36630
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Entry
SLG_36630 CDS
T01622
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SLG_36630 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssy01007
]
SLG_36630 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssy03016
]
SLG_36630 (hisS)
Enzymes [BR:
ssy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SLG_36630 (hisS)
Amino acid related enzymes [BR:
ssy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SLG_36630 (hisS)
Transfer RNA biogenesis [BR:
ssy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SLG_36630 (hisS)
Prokaryotic type
SLG_36630 (hisS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAK68338
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Position
complement(3942748..3943995)
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AA seq
415 aa
AA seq
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MAKIPTPRPIRGTQDMLGESADRFMHVVETFERVRKLYGFRRVEVPVFEATAVFSRSLGE
TTDVVSKEMYTFEDRGGDSVTLRPEFTAGIARAYVTEGWQQYAPLKVATHGPLFRYERPQ
KGRYRQFHQLDAEIIGASEPLADAELLVFADQLLKELGIVEGVTLTLNTLGDYQSREAWR
SALVAYFEGHRDQLSEESKDRLHRNPLRILDSKDPGDQAIVAGAPDIDAYLTDEAQAFFG
KVTDGLKAAGVDWTRNARLVRGLDYYRHTAFEFVTDRLGAQGTVLGGGRYDGLIETLGGP
STPAVGWAAGIERLGMLLDVMPSERLDVAVAVEDDAALFEAVSAVAYLRRENLSADLIAS
GSPKKRFDKAAKLNARTILSVVKTDGQLRFGHRGEPGLIDRVSDVLDRRFPKDEA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcccaacaccacggccgatccgcggcacccaggacatgctcggcgaaagc
gccgaccgcttcatgcatgtcgtcgagacgttcgagcgcgtccgcaagctctacggcttc
aggcgcgtcgaagtgccggtgttcgaggcgacggcggtcttctcccgctcgctgggcgag
acgaccgacgtggtctccaaggagatgtatacgttcgaggaccgcggcggggattcggtg
acgctgcggccggaattcacggcgggcatcgcgcgcgcctatgtcaccgagggctggcag
caatatgcgccgctcaaggtcgcgacgcacgggcccctgtttcgctacgagcgcccccag
aagggccgctatcgccaattccaccagctcgacgccgagatcatcggcgcgtccgagccg
ctggcggacgcggagctgctggtctttgccgatcagcttctcaaggagctgggcatcgtc
gagggcgtgacgctcacgctcaacacgctgggcgactatcagagccgcgaggcctggcgc
agcgcgctcgtcgcctatttcgaggggcatcgcgatcagctcagcgaggagagcaaggac
cggctgcatcgcaatccgctgcgcattctcgacagcaaggatccgggcgatcaggcgatc
gtggccggcgcgccggacatcgatgcctatctgaccgatgaggcgcaggccttcttcggg
aaagtgacggacgggttgaaggctgccggcgtcgactggacgcgcaatgcccggctggtg
cgcgggctggattattatcgccacaccgccttcgagttcgtcaccgaccggctcggcgcg
cagggcaccgtgctcggcggcgggcgctatgacggactcatcgagacgctcggcgggcca
agcacaccggccgtcggctgggcggccggcatcgagcggctggggatgctgctggatgtg
atgccgagcgagagattggatgtcgccgtcgccgttgaggacgacgctgcgttgtttgaa
gcagttagcgcagtcgcatatctgcgtcgcgagaacctaagtgcagatttgatcgcgtca
gggtcccccaagaagcgattcgacaaggcagccaaattgaacgcacgcactatcctttca
gtcgtgaagactgacggccaattacggttcggtcatcgaggtgaacctggcttgatcgat
cgagtgtctgatgtgctggatcggcggttcccgaaggacgaggcttga
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