Sphingobium sp. SYK-6: SLG_37270
Help
Entry
SLG_37270 CDS
T01622
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SLG_37270 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_37270 (priA)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLG_37270 (priA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SLG_37270 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_16
AAA_30
zf_Rg
PIF1
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
BAK68402
LinkDB
All DBs
Position
4009066..4011234
Genome browser
AA seq
722 aa
AA seq
DB search
MTRARLILLNAALGPLDYRVPAGMSVEPGSIVVAPLGPRPMTGVVWEAERFPDVPPVGDN
RLRPLLGVLDAPPLPAALRRLIEWTAAYYLAPHAAVLRMALASMSALEGGKTVIEYRPSG
ALPERLTAQRAQALERIGERQGLVRELAAIGDVSDAVIRGLIKQGALEAVEVSTDLPFPR
PDPDHAAISLSPGQEAAAQRLVAQVRSGESHTVLLDGVTGSGKTEVYFEAIAEALRQGRQ
TLVLLPEIALTEPFLDRFTARFGCAPVPWHSGLKQSDRRRAWRAIAEGEAGVVVGARSAL
FLPYRKLGLIVVDEAHETSFKQEEGVRYHARDVAVMRGLMESCPVVLASATPAIETRHQV
ELGRYEEIKLPSRYGGAELPEIIGVDLTHDPPDRGRWLAPPLVQAMRETLARGEQSLLFL
NRRGYAPLTLCRHCGYRFQCPNCSAWMVEHRLTRRLACHHCGHEVPTPDSCPECHESDAL
VACGPGVERIADEVKALFPDARTAIVTSDTLWSPARAAAFVRDVAGGAVDIIVGTQLVTK
GYHFPELTLVGVVDADLGLDGGDLRASERTYQQIVQVSGRAGRGEKPGRVFIQTRAPDAP
VMRALLEGDDAAFYAAETASRRSANAPPFGRFAAIIVSDTDAALARETARRIGAAGPRQE
GLEIYGPAEATLAVLRGRHRWRLLVHARRSIDLQAIVRDWLSAIDWKSSTRVSVDVDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcgcgcctcatcctgctcaatgccgctcttggccccctcgactaccgcgtg
ccggcaggcatgtcggtggagccgggcagcatcgtcgtggcgccgctcggcccccggccc
atgaccggcgtggtctgggaagccgagcgctttcccgacgtgcccccggtgggcgacaat
cgcctgcggccgctgcttggcgtgctcgatgcgccgccactgcccgcggcgttgcggcgc
ctgatcgaatggaccgctgcttattatctggcgccgcacgccgccgtgctgcgcatggcc
cttgcctccatgtccgctctggaaggcggcaagacggtcatcgaataccggccgagcggc
gccttgccggagaggctgaccgcccagcgtgcgcaggcgctggagcgaatcggcgagcgg
cagggcctcgtgcgcgagctcgcggcgatcggcgatgtcagcgacgcggtcattcgcggc
ctcatcaagcagggcgcgctcgaggccgtcgaggtgtcgaccgacctgcccttcccccgg
cccgaccccgaccacgccgccatatcgctgagcccgggacaagaagccgccgcgcagcgc
ctcgtcgcgcaagtgaggtccggcgaatcccataccgtgctgctcgacggcgtcaccgga
tcgggaaagaccgaggtctatttcgaggcgatcgcggaagcactgaggcagggccgccag
accctcgtcctgcttcccgagatcgcgctgacggaaccgttcctcgaccgcttcaccgcg
cgtttcggctgcgcgcctgtgccctggcactcgggcctcaagcaatccgaccggcggcgg
gcatggcgcgccattgccgagggcgaggccggcgtcgtcgtcggcgcccgctccgccctg
ttcctgccctatcgcaagctcggcctgatcgtcgtcgatgaagcgcacgagaccagcttc
aagcaggaggaaggcgtgcgctaccatgcgcgcgacgtggcggtgatgcgcggtctcatg
gagagctgcccggtggtgctggcgtccgccacgccggccatcgaaacccgccatcaggtg
gaactgggccgctacgaggaaatcaagctcccgtcccgctacggcggcgcggagctgccc
gagatcatcggggtcgacctgacgcacgacccgccggatcgcgggcgctggctggcgccg
ccgctcgtccaggccatgcgcgagacgctggcgcgcggcgagcaatcgctgctgttcctg
aaccggcggggctatgcgccgctcaccctgtgccgccattgcggctaccgcttccagtgc
cccaactgttcggcctggatggtcgagcatcgcctcacgcggcgccttgcctgccaccat
tgtggccacgaagtcccgacgccggacagctgcccggaatgccatgagagcgatgcgctc
gtggcttgcggccccggggtggagcgaatcgcggatgaagtgaaggccctcttcccggac
gcgcgcacggccatcgtcacctctgacacgctctggtcgccggccagggcggcggcgttc
gttagggatgtggcgggcggcgcggtggacatcatcgtcggcacgcagctcgtcaccaaa
ggttatcatttcccggagctgaccttggtcggcgtggtcgatgccgatctgggcctcgat
ggcggcgatctgcgtgcgtccgaacggacctatcagcagatcgtgcaggtctccgggcgc
gccgggcgcggcgagaagcccggccgggtcttcatccagacgcgcgcgcccgatgcgccg
gtaatgcgcgcgctgctcgaaggggacgatgcagctttctatgcggcggaaaccgccagc
cgccgctccgccaatgcgcctccgttcgggcgattcgccgcgatcatcgtgagcgacacg
gacgcggcgctcgcacgggaaacggcccggcgtatcggggctgccgggccgcggcaggag
gggctggaaatctatggaccggccgaagcgacgctggccgtgctacgcgggcggcatcgc
tggcgactgctggttcatgcccgacgctcgatcgatctgcaggccatcgtgcgcgactgg
ctctcggcgatcgactggaaaagcagcacacgcgtgagcgtggacgtcgatccttacagc
ttcgtttga
DBGET
integrated database retrieval system
