Sphingobium sp. SYK-6: SLG_37640
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Entry
SLG_37640 CDS
T01622
Symbol
holA
Name
(GenBank) putative DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03030
DNA replication
ssy03430
Mismatch repair
ssy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLG_37640 (holA)
03430 Mismatch repair
SLG_37640 (holA)
03440 Homologous recombination
SLG_37640 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_37640 (holA)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_37640 (holA)
Enzymes [BR:
ssy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLG_37640 (holA)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLG_37640 (holA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLG_37640 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAK68439
UniProt:
G2IR73
LinkDB
All DBs
Position
complement(4051822..4052805)
Genome browser
AA seq
327 aa
AA seq
DB search
MSLRADNAAALKALDNPAADIRLYLLFGPDEAGSEALAARFARAMGPGAERVDLDGAALR
SDPARLPDEAAAISMFGDRRWIRVQPAGEEVLPAVQTLLEADATGDPVVMIAGNLRKTSK
LLGFCDAHKAAVTIVSYAPEGRNAEQLAVTMARESGLELPGDLARRLVALSGGERGLLAG
EIEKLVLYLDATPEAPRAATDEALDALGAEGGEQQLFKAAMTVLSGNIRGTEQEMARLRQ
SGGSLAGLLRITLQRAVGLAQTQAGQGQRYGGRGDDDLAQRWSADDLGRAIRRMAQAERT
SRLSHGMGETVLAQELVNVARLAARRR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcgccgacaatgcagcggcgctcaaggcgctcgacaatcccgccgcggac
atccggctctacctgcttttcggtcccgatgaagcgggcagcgaggcactggccgcccgc
tttgcccgggccatgggacccggcgcggaacgcgtcgatctggacggtgcggcattgcgc
agcgatcctgctcgcctgccggacgaagccgccgccatttccatgtttggggatcgtcgc
tggatccgcgtccagccggccggtgaggaagtcctgccggcggtgcagacgctgctggag
gcggatgccactggcgatccggtggtgatgattgccggcaacctgcgcaagacaagcaag
ctgctcggtttctgcgatgcgcacaaagccgccgtgacgatcgtcagctatgcgccggaa
ggccgcaatgccgagcagctcgccgtcaccatggcgcgcgagtccggtctggaactgccc
ggcgatctcgcgcgacggctggttgcgctctccggcggggaacggggcctgctggccggc
gagatcgagaagcttgtcctctatctcgatgctacgccggaagcgcccagggcggccacc
gacgaagcgctggacgcgcttggcgccgagggcggcgagcagcagctgttcaaggcggcg
atgaccgtgctctccggcaacatccggggcaccgagcaggagatggcgcggctgcgccag
agcggcggatcgctcgccggcctcctgcgcatcacgctccagagagccgtcgggctggcg
cagacgcaggcgggccagggccagcgctacggtggacggggagacgacgatctcgcgcag
cgctggtcggctgacgatctggggcgcgccattcggcgcatggcgcaggccgagcgaacg
agccgcctctcgcacggcatgggggaaacggtgctggcgcaggaactggtcaacgtcgcg
aggctggcggcccgccgtcgctga
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