Sphingobium sp. SYK-6: SLG_38800
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Entry
SLG_38800 CDS
T01622
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_38800
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SLG_38800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
TrwB_AAD_bind
AAA_22
AAA_10
SLFN-g3_helicase
CbiA
AAA_30
AAA_16
T2SSE
AAA_7
Hydrolase
Zeta_toxin
AAA_25
AAA_19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAK68555
UniProt:
G2IS00
LinkDB
All DBs
Position
4166907..4168505
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AA seq
532 aa
AA seq
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MTDETSIFIGLGGGEPQKLVLRRANRHGLIAGATGTGKTVTLQGLAESFSARGVPVFVAD
VKGDLSGIAMAGSPTAKNADKLIARAQEIGLADYAFADNPAMFWDLYGEQGHPIRTTVSE
MGPLLLARIMGLNETQEGVLTIAFRVADEEGLLLLNLEDLQSMLAYCSEKADELTARYGN
VSKASVGAIQRQLLQLESQGGGHFFGEPALDIQDFIRTDEKGRGYVNILAADKLMQSPRL
YGTFLLWLMSELFQTLPEVGDPDKPVLVFFFDEAHLLFDDAPKALVDKIEQVVRLIRSKG
VGIYFVTQNPIDIPEDIAGQLGNRVQHALRAFTPREQKAIKAAAETFRPNPALDVAEAIT
QLRVGEALVSLLQEDGSPSIVQRTLIAPPRSRLGPLEAKERAIIQSISPCEGQYEEEVDR
ESAEEILAARADAAIAAAAAEKAQAEADKAAAAQAKVEARQREVEARARAREAAKPSNLD
RAIQSATRSAGSSIGRQVANELGKQILGGSSRSRSGGLVGKLVRGVLGGLFK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagacatccatcttcatcggccttggcggcggggagccgcagaagctcgtc
ctgcgccgcgccaatcgccacggcctgatcgccggcgccacaggcacgggcaagacggtc
acgctgcagggccttgccgagagcttctccgcccggggcgtgccggtgttcgtcgcggac
gtgaagggcgatctctcgggcattgccatggccggctcgccgaccgcgaagaatgcggac
aagctgatcgcccgcgcgcaggaaatcggcctcgctgattatgcctttgccgacaacccc
gccatgttctgggatctctatggcgagcagggtcatcccatccgcaccaccgtctctgaa
atggggccgttgctgctggcacgcatcatgggcctcaacgagacgcaggaaggcgtgctc
accatcgccttccgcgtcgccgacgaggaagggctgctgctcctcaatctggaggatctg
caatccatgctcgcttattgcagcgagaaggcggacgaactcacggcccgctacggcaat
gtcagcaaggccagcgtcggcgcgatccagcgccagcttctccagctcgaatcgcagggc
ggcgggcatttcttcggcgagccggcgctcgacatccaggatttcatccggaccgacgag
aaagggcgcggctacgtcaacatcctcgcggcggacaagctcatgcagagcccccggctc
tacggcacgttcctgctctggctgatgtccgaactgttccagacgcttcccgaggtcggc
gatccggacaagccggtgctcgtcttcttcttcgacgaagcgcatctgctgttcgacgac
gcgccaaaggcgctggtcgacaagatcgagcaagtggtgcggctcatccgctccaagggc
gtgggcatttatttcgtgacgcagaacccgatcgacattcccgaggatattgccgggcag
ctcggtaatcgcgtccagcatgcgctgcgtgccttcacgccgcgcgagcagaaggcgatc
aaggcagccgccgagaccttccggcccaatcccgcgctggacgtggccgaggccatcacg
cagctacgggtcggcgaggcgctggtgtcgctgcttcaggaggatggatcgccgtccatc
gtccagcgtacgctcatcgcgccgccacgctcccggctggggccgctggaggccaaggag
cgggccatcatccagtccatctcgccctgcgagggccagtatgaggaggaagtcgaccgc
gaatcggccgaggagattctcgcggcgcgtgccgatgccgccatcgccgcggccgcggcc
gagaaagcgcaggccgaggcggacaaggccgccgccgcgcaggcgaaggtcgaggcgaga
cagcgcgaggtcgaggcgcgggcccgggcgcgcgaggcggccaagccctccaatctcgac
cgggcgatccagtccgccacgcgatccgccggctcgtcgatcggccggcaggtcgcgaac
gagctcggcaagcagatcctcggcggatcctcacgcagccgcagcggcggtctggtcggc
aagctcgtgcgcggcgtgctcggcggcctgttcaaatag
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