Sphingobium sp. SYK-6: SLG_p_00830
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Entry
SLG_p_00830 CDS
T01622
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssy03021
]
SLG_p_00830
Transcription machinery [BR:
ssy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLG_p_00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_1
PhyR_sigma-like
Cas9_b_hairpin
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BAK68671
UniProt:
G2ITZ6
LinkDB
All DBs
Position
pSLPG:complement(79671..80237)
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AA seq
188 aa
AA seq
DB search
MTACLPDCSDGELAALALGGRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVA
AFAALNRYDVTRPFQVWMSRIVINKCHDWRRRRAVRNFFALALPLGEADGVADDAPLPDQ
AIGAEQQLAQAMKAIAALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARAR
LSEILKKV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtgcctccccgactgctcggacggggagctcgcggctctggcgcttggaggc
cggcaagcggcctatggcgagctggtccgccggcatcaaggttgggttcaccggctcgtg
cgcagccatgtcggatctatggatgaggcattggatgtcacccaggcgagcttcgtcgcg
gcctttgccgcactcaaccgctatgacgtaacccgacccttccaggtctggatgtcccgg
attgtcatcaacaaatgccatgactggcggcgtcggcgagcggttcgaaatttctttgcc
ctagccctaccgctcggcgaggcggacggcgtcgccgacgacgcaccgctgcccgatcag
gcgatcggggccgaacagcagctcgcgcaagcaatgaaagcgattgctgccctgccgtct
tccctcaaggacacgcttattttgcgtacgatcgacgagaaatcggaagctgaaaccgcc
gaaattctcgggatcagccagaaggcggtcgaaacgcgcctctatcgagctagggcacgc
ctttcggaaatattaaagaaagtttga
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